RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CGB1A6NKQ9 187 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 SPRY2O43597 315 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 C8orf88P0DMB2 117 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 TNFRSF9Q07011 255 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 CEMP1Q6PRD7 247 aaPredicted RBP17.82■□□□□ 0.44
USP47-205ENST00000525257 ZNF367Q7RTV3 350 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 WFDC3Q8IUB2 231 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 OR2C3Q8N628 320 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 UBQLN2Q9UHD9 624 aa17.82■□□□□ 0.44
USP47-205ENST00000525257 TNFSF12O43508 249 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 APOC4P55056 127 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 TBCEQ15813 527 aaPredicted RBP17.81■□□□□ 0.44
USP47-205ENST00000525257 C22orf42Q6IC83 251 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 ZNF66Q6ZN08 573 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 NDUFB11Q9NX14 153 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 MRPL27Q9P0M9 148 aaKnown RBP17.81■□□□□ 0.44
USP47-205ENST00000525257 ANXA10Q9UJ72 324 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 TP53TG1Q9Y2A0 90 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 UFC1Q9Y3C8 167 aa17.81■□□□□ 0.44
USP47-205ENST00000525257 GALP22466 123 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 BMI1P35226 326 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 GNG2P59768 71 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 TIMM50Q3ZCQ8 353 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 Q6ZWC4 215 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 SLC38A6Q8IZM9 456 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 ZNF502Q8TBZ5 544 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 NRG4Q8WWG1 115 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 HRASLSQ9HDD0 168 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 BET1LQ9NYM9 111 aa17.8■□□□□ 0.44
USP47-205ENST00000525257 TRDV1A0A1B0GX56 115 aa17.79■□□□□ 0.44
USP47-205ENST00000525257 SSX5O60225 188 aa17.79■□□□□ 0.44
USP47-205ENST00000525257 OR2B8PP59922 312 aa17.79■□□□□ 0.44
USP47-205ENST00000525257 PLET1Q6UQ28 207 aa17.79■□□□□ 0.44
USP47-205ENST00000525257 SECTM1Q8WVN6 248 aa17.79■□□□□ 0.44
USP47-205ENST00000525257 ELLP55199 621 aaPredicted RBP17.78■□□□□ 0.44
USP47-205ENST00000525257 SPAG16Q8N0X2 631 aa17.78■□□□□ 0.44
USP47-205ENST00000525257 RPP25LQ8N5L8 163 aaKnown RBP17.78■□□□□ 0.44
USP47-205ENST00000525257 OR4A5Q8NH83 315 aa17.78■□□□□ 0.44
USP47-205ENST00000525257 SPAG8Q99932 426 aaPredicted RBP17.78■□□□□ 0.44
USP47-205ENST00000525257 C5orf66Q9H5L9 145 aa17.78■□□□□ 0.44
USP47-205ENST00000525257 CCL28Q9NRJ3 127 aa17.78■□□□□ 0.44
USP47-205ENST00000525257 TRAV3A0A0B4J244 114 aa17.77■□□□□ 0.44
USP47-205ENST00000525257 IGLC7A0M8Q6 106 aa17.77■□□□□ 0.44
USP47-205ENST00000525257 ZNF436Q9C0F3 470 aaPredicted RBP17.77■□□□□ 0.44
USP47-205ENST00000525257 KLK5Q9Y337 293 aaPredicted RBP17.77■□□□□ 0.44
USP47-205ENST00000525257 ANKRD65E5RJM6 399 aa17.76■□□□□ 0.43
USP47-205ENST00000525257 PTHLHP12272 177 aa17.76■□□□□ 0.43
USP47-205ENST00000525257 RPA2P15927 270 aa17.76■□□□□ 0.43
USP47-205ENST00000525257 TMEM190Q8WZ59 177 aa17.76■□□□□ 0.43
USP47-205ENST00000525257 AIFM2Q9BRQ8 373 aa17.76■□□□□ 0.43
USP47-205ENST00000525257 HERC2O95714 4834 aa17.76■□□□□ 0.43
USP47-205ENST00000525257 SULT1C2O00338 296 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 UBE2CO00762 179 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 TGOLN2O43493 480 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 PTBP1P26599 531 aaKnown RBP eCLIP17.75■□□□□ 0.439e-9■■■■■ 34
USP47-205ENST00000525257 ARPC4P59998 168 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 ODF3L2Q3SX64 289 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 STPG3Q8N7X2 389 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 OR13F1Q8NGS4 319 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 RNF183Q96D59 192 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 COMMD5Q9GZQ3 224 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 THYN1Q9P016 225 aa17.75■□□□□ 0.43
USP47-205ENST00000525257 NOTOA8MTQ0 251 aa17.74■□□□□ 0.43
USP47-205ENST00000525257 TSPAN4O14817 238 aa17.74■□□□□ 0.43
USP47-205ENST00000525257 SCGNO76038 276 aa17.74■□□□□ 0.43
USP47-205ENST00000525257 RPL35AP18077 110 aaKnown RBP17.74■□□□□ 0.43
USP47-205ENST00000525257 FCGR2CP31995 323 aa17.74■□□□□ 0.43
USP47-205ENST00000525257 OR10W1Q8NGF6 305 aa17.74■□□□□ 0.43
USP47-205ENST00000525257 DAPK2Q9UIK4 370 aa17.74■□□□□ 0.43
USP47-205ENST00000525257 OR2T8A6NH00 312 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 UPK2O00526 184 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 DEDDO75618 318 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 S1PR2O95136 353 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 TAS2R31P59538 309 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 BEST4Q8NFU0 473 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 LGALS14Q8TCE9 139 aa17.73■□□□□ 0.43
USP47-205ENST00000525257 DAZ1Q9NQZ3 744 aaKnown RBP17.73■□□□□ 0.43
USP47-205ENST00000525257 KIR2DL5BA0A0G2JN68 375 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 KIR2DL5BA0A0G2JPC4 375 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 RBFOX2O43251 390 aaKnown RBP eCLIP17.72■□□□□ 0.439e-7■■■□□ 18.8
USP47-205ENST00000525257 ATF4P18848 351 aaPredicted RBP17.72■□□□□ 0.43
USP47-205ENST00000525257 MSMO1Q15800 293 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 LAMTOR1Q6IAA8 161 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 KIR2DL5AQ8N109 375 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 TMEM217Q8N7C4 229 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 GVQW1Q8N7I0 195 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 KIR2DL5BQ8NHK3 375 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 VN1R17PQ8TDU5 208 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 QTRT1Q9BXR0 403 aaKnown RBP17.72■□□□□ 0.43
USP47-205ENST00000525257 SLC5A7Q9GZV3 580 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 TMEM140Q9NV12 185 aa17.72■□□□□ 0.43
USP47-205ENST00000525257 HPRT1P00492 218 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 PPYP01298 95 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 NQO2P16083 231 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 FXYD4P59646 89 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 CATR1Q13166 79 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 POU2AF1Q16633 256 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 ZNF773Q6PK81 442 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 GDPD1Q8N9F7 314 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 ZBTB34Q8NCN2 500 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms