RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 DYNC1I1O14576 645 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 CCDC22O60826 627 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 HLA-AP01891 365 aaKnown RBP4.58□□□□□ -1.68
NEDD8-203ENST00000524927 HTN3P15516 51 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 ATP5G2Q06055 141 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 ST3GAL3Q11203 375 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 TEX30Q5JUR7 227 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 CEACAM19Q7Z692 300 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 FAM223AQ8IWN6 122 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 FAM58AQ8N1B3 248 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 FAM86B1Q8N7N1 296 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 CHST4Q8NCG5 386 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 RNF133Q8WVZ7 376 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 GHSRQ92847 366 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 NIPSNAP3BQ9BS92 247 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 UPK3BQ9BT76 320 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 CHST5Q9GZS9 411 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 RIBC2Q9H4K1 309 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 REEP1Q9H902 201 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 DHRS4-AS1Q9P1J3 65 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 LAMP5Q9UJQ1 280 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 EXOSC1Q9Y3B2 195 aaKnown RBP4.58□□□□□ -1.68
NEDD8-203ENST00000524927 GMEB1Q9Y692 573 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 MEIKINA0A087WXM9 373 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 TMEM189A5PLL7 270 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 TVP23AA6NH52 213 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 CA2P00918 260 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 IGLV2-23P01705 113 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 GALP22466 123 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 PPIBP23284 216 aaKnown RBP4.57□□□□□ -1.68
NEDD8-203ENST00000524927 SSTR5P35346 364 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 CRISP1P54107 249 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 RHOGP84095 191 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 FXYD3Q14802 87 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 MICAQ29983 383 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 CYBRD1Q53TN4 286 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 CLVS2Q5SYC1 327 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 TMEM42Q69YG0 159 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 GRPEL2Q8TAA5 225 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 C9orf85Q96MD7 179 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 RBFOX1Q9NWB1 397 aaKnown RBP4.57□□□□□ -1.68
NEDD8-203ENST00000524927 SNX12Q9UMY4 172 aa4.57□□□□□ -1.68
NEDD8-203ENST00000524927 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 ZNF593O00488 134 aaPredicted RBP4.56□□□□□ -1.68
NEDD8-203ENST00000524927 SLC22A1O15245 554 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 KBTBD11O94819 623 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 GPX2P18283 190 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 ATXN7L3Q14CW9 347 aaPredicted RBP4.56□□□□□ -1.68
NEDD8-203ENST00000524927 METTL21CQ5VZV1 264 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 SLC25A26Q70HW3 274 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 OR51T1Q8NGJ9 327 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 OR4K13Q8NH42 304 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 GTF2H4Q92759 462 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 TAMM41Q96BW9 452 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 PPP1R36Q96LQ0 422 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 COA4Q9NYJ1 87 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 KIF25Q9UIL4 384 aa4.56□□□□□ -1.68
NEDD8-203ENST00000524927 PUS1Q9Y606 427 aaKnown RBP eCLIP4.56□□□□□ -1.68
NEDD8-203ENST00000524927 SDCBPO00560 298 aaPredicted RBP4.55□□□□□ -1.68
NEDD8-203ENST00000524927 ARPC3O15145 178 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 ANXA3P12429 323 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 ZNF44P15621 663 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 H2AFXP16104 143 aaPredicted RBP4.55□□□□□ -1.68
NEDD8-203ENST00000524927 HIST1H1CP16403 213 aaKnown RBP4.55□□□□□ -1.68
NEDD8-203ENST00000524927 PRKACAP17612 351 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 GNRHRP30968 328 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 MRPS25P82663 173 aaKnown RBP4.55□□□□□ -1.68
NEDD8-203ENST00000524927 CLINT1Q14677 625 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 MEDAGQ5VYS4 303 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 SCXQ7RTU7 201 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 TRPM8Q7Z2W7 1104 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 TMEM179BQ7Z7N9 219 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 PROKR2Q8NFJ6 384 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 OR2T4Q8NH00 348 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 IFT81Q8WYA0 676 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 ERMAPQ96PL5 475 aaPredicted RBP4.55□□□□□ -1.68
NEDD8-203ENST00000524927 CLCC1Q96S66 551 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 SULT4A1Q9BR01 284 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 COMMD4Q9H0A8 199 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 HMG20AQ9NP66 347 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 IMPAD1Q9NX62 359 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 SMPD3Q9NY59 655 aaPredicted RBP4.55□□□□□ -1.68
NEDD8-203ENST00000524927 SLC25A37Q9NYZ2 338 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 UFC1Q9Y3C8 167 aa4.55□□□□□ -1.68
NEDD8-203ENST00000524927 TRBV9A0A0B4J1U6 114 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 FAM74A7A6NL05 159 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 SLC31A2O15432 143 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 ZNF253O75346 499 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 RBBP9O75884 186 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 H2BFMP0C1H6 154 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 GATA1P15976 413 aaPredicted RBP4.54□□□□□ -1.68
NEDD8-203ENST00000524927 GZMHP20718 246 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 GCAP28676 217 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 PYCR1P32322 319 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 FXYD6P3P58550 94 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 RPL37AP61513 92 aaKnown RBP4.54□□□□□ -1.68
NEDD8-203ENST00000524927 PAX5Q02548 391 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 FAM74A3Q4VXF1 159 aa4.54□□□□□ -1.68
NEDD8-203ENST00000524927 ZNF600Q6ZNG1 722 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms