RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 CLEC5AQ9NY25 188 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 C19orf25Q9UFG5 118 aaPredicted RBP7□□□□□ -1.29
CSMD1-213ENST00000523488 WDR83OSQ9Y284 106 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
CSMD1-213ENST00000523488 HS3ST3A1Q9Y663 406 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 C7orf71A4D174 169 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 M0R296 226 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 BMPR1BO00238 502 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 MPDU1O75352 247 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 FRMD6-AS1P0C7T7 363 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 C17orf67Q0P5P2 114 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 TIGITQ495A1 244 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 NFAM1Q8NET5 270 aaPredicted RBP6.99□□□□□ -1.29
CSMD1-213ENST00000523488 OR2T6Q8NHC8 308 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 NPCDR1Q9BY65 106 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 GTSF1LQ9H1H1 148 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 WNT16Q9UBV4 365 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 COL27A1Q8IZC6 1860 aaPredicted RBP6.99□□□□□ -1.29
CSMD1-213ENST00000523488 SP9P0CG40 484 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 UQCRFS1P47985 274 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 ZNF841Q6ZN19 808 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 OXGR1Q96P68 337 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 GCM1Q9NP62 436 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 OR51B2Q9Y5P1 312 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 TRAV8-6A0A0B4J262 113 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 OPRK1P41145 380 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 GNG4P50150 75 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 RPL31P62899 125 aaKnown RBP6.99□□□□□ -1.29
CSMD1-213ENST00000523488 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
CSMD1-213ENST00000523488 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 OR10W1Q8NGF6 305 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 TMEM70Q9BUB7 260 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 MS4A6AQ9H2W1 248 aa6.99□□□□□ -1.29
CSMD1-213ENST00000523488 CACNA1HO95180 2353 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 IGLV3-12A0A075B6K2 115 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 ISLRO14498 428 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 ZIC3O60481 467 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 FGF6P10767 208 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 KIR2DL1P43626 348 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 POLEQ07864 2286 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 FXYD3Q14802 87 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 CLDN23Q96B33 292 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 ZC2HC1AQ96GY0 325 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 EAF1Q96JC9 268 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 FGF23Q9GZV9 251 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 LIN7CQ9NUP9 197 aaKnown RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 CRIM1Q9NZV1 1036 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 OR2W1Q9Y3N9 320 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 NCOA6Q14686 2063 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 IGLV3-19P01714 112 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 AMY1AP04745 511 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 CYC1P08574 325 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 HHEXQ03014 270 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 FAM27BQ5VT28 67 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 TMEM251Q8N6I4 163 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 C18orf32Q8TCD1 76 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 LRRC61Q9BV99 259 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 MBNL3Q9NUK0 354 aaKnown RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 DHHO43323 396 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 CFIP05156 583 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 CRYBB3P26998 211 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 FGF12P61328 243 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 TNXAQ16473 311 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 TCTEX1D4Q5JR98 221 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 SFTPA2Q8IWL1 248 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 ZNF611Q8N823 705 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 SLC37A2Q8TED4 501 aa6.98□□□□□ -1.29
CSMD1-213ENST00000523488 SLC25A10Q9UBX3 287 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-213ENST00000523488 ARL14EPLP0DKL9 152 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 GCSAMLQ5JQS6 135 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 EBLN2Q6P2I7 272 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 ZBTB34Q8NCN2 500 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 A0A087X0K7 114 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 TNFRSF4P43489 277 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 C16orf47Q6ZP98 133 aaPredicted RBP6.97□□□□□ -1.29
CSMD1-213ENST00000523488 BPIFA4PQ86YQ2 179 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 NHLRC2Q8NBF2 726 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 C1QTNF5Q9BXJ0 243 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 WDR54Q9H977 334 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 hDV102S1A0JD36 115 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 NPIPA3F8WFD2 350 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 H3BUT2 72 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 J3QR89 54 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 HTR1DP28221 377 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 BRWD1-AS2P59051 145 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 SPINK9Q5DT21 86 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 MKXQ8IYA7 352 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 ZNF645Q8N7E2 425 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 OR52E5Q8NH55 327 aa6.97□□□□□ -1.29
CSMD1-213ENST00000523488 OR1L1Q8NH94 360 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms