RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 B2MP61769 119 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 ARF6P62330 175 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 POLR2GP62487 172 aaKnown RBP eCLIP5.56□□□□□ -1.52
SPIDR-218ENST00000522222 NHLH2Q02577 135 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 PRB3Q04118 309 aaPredicted RBP5.56□□□□□ -1.52
SPIDR-218ENST00000522222 HABP2Q14520 560 aaPredicted RBP5.56□□□□□ -1.52
SPIDR-218ENST00000522222 ATP6V1FQ16864 119 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 IGSF11Q5DX21 431 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 KRBOX4Q5JUW0 171 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 BRD3OSQ6XYD6 125 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 C9orf139Q6ZV77 190 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 VMO1Q7Z5L0 202 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 KIR3DL3Q8N743 410 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.56□□□□□ -1.52
SPIDR-218ENST00000522222 LY6G5BQ8NDX9 201 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 OR10V1Q8NGI7 309 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 MRPL30Q8TCC3 161 aaKnown RBP5.56□□□□□ -1.52
SPIDR-218ENST00000522222 TVP23CQ96ET8 276 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 CLCC1Q96S66 551 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 SCRT1Q9BWW7 348 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
SPIDR-218ENST00000522222 IGHV1-69DA0A0B4J2H0 117 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 FAM24AA6NFZ4 105 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 AP4M1O00189 453 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 TXNL1O43396 289 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 ZNF737O75373 536 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 HAND1O96004 215 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 IGHV1-69P01742 117 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 S100PP25815 95 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 DYNLT3P51808 116 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 UBE2KP61086 200 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 COL10A1Q03692 680 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 CATR1Q13166 79 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 KLRD1Q13241 179 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 PDCD1Q15116 288 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 DEFB112Q30KQ8 113 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 DNLZQ5SXM8 178 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 TRAT1Q6PIZ9 186 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 RBMS3Q6XE24 437 aaKnown RBP5.55□□□□□ -1.52
SPIDR-218ENST00000522222 Q8N7P7 452 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 DYRK2Q92630 601 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 LHX4Q969G2 390 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 BTF3L4Q96K17 158 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 DUX5Q96PT3 197 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 CIB3Q96Q77 187 aaPredicted RBP5.55□□□□□ -1.52
SPIDR-218ENST00000522222 JMJD8Q96S16 334 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 CTDSP1Q9GZU7 261 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 SH3BGRL3Q9H299 93 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 TMPRSS5Q9H3S3 457 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 ZFAND3Q9H8U3 227 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 KCNIP1Q9NZI2 227 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 FBXO7Q9Y3I1 522 aa5.55□□□□□ -1.52
SPIDR-218ENST00000522222 ELOA3CA0A087WX78 387 aaPredicted RBP5.54□□□□□ -1.52
SPIDR-218ENST00000522222 CENPVL3A0A0U1RRI6 287 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 LOC102723971A0A1B0GUV8 181 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 C9JQL5 133 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 M0R1W7 72 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 HSD17B6O14756 317 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SH2D1BO14796 132 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SYNGR2O43760 224 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 CHST1O43916 411 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SRP19P09132 144 aaKnown RBP5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SCTP09683 121 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 PPP1CCP36873 323 aaKnown RBP5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SNRPEP62304 92 aaKnown RBP5.54□□□□□ -1.52
SPIDR-218ENST00000522222 RPL31P62899 125 aaKnown RBP5.54□□□□□ -1.52
SPIDR-218ENST00000522222 EDDM3AQ14507 147 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 HERPUD1Q15011 391 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 AKIRIN2Q53H80 203 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 XP32Q5T750 250 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SPSB3Q6PJ21 355 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 HEPN1Q6WQI6 88 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 TCF23Q7RTU1 214 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 ZNF429Q86V71 674 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 LILRB2Q8N423 598 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SPATA3Q8NHX4 192 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 C2CD4CQ8TF44 421 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 MBD3L1Q8WWY6 194 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 FAM234AQ9H0X4 552 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 SEBOXQ9HB31 216 aaPredicted RBP5.54□□□□□ -1.52
SPIDR-218ENST00000522222 CCL28Q9NRJ3 127 aa5.54□□□□□ -1.52
SPIDR-218ENST00000522222 IGKV1D-13A0A0B4J2D9 117 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 A0A0U1RQK1 487 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 A0A1W2PPH5 198 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 A0A1W2PRD5 423 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 A0A1W2PRF3 423 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 A0A1W2PRM7 423 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 TMEM30CPA0ZSE6 113 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 PCP4L1A6NKN8 68 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 H3BQ15 152 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 SIRPB1O00241 398 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 PSPNO60542 156 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 EIF3GO75821 320 aaKnown RBP eCLIP5.53□□□□□ -1.52
SPIDR-218ENST00000522222 OPN1MWP04001 364 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 OPN1MW2P0DN77 364 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 OPN1MW3P0DN78 364 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 OR13C7P0DN81 318 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 IGKV1-13P0DP09 117 aa5.53□□□□□ -1.52
SPIDR-218ENST00000522222 BCL2P10415 239 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1023.4 ms