RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 PLP1P60201 277 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 KRTAP10-4P60372 401 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 RAB14P61106 215 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 RRAS2P62070 204 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ACTA2P62736 377 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 RPS27AP62979 156 aaKnown RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ACTG2P63267 376 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ACTC1P68032 377 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ACTA1P68133 377 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 SCRN3Q0VDG4 424 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 TMEM187Q14656 261 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF79Q15937 498 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 SSX1Q16384 188 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ECSCRQ19T08 205 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 MRGPRG-AS1Q2M3A8 158 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 CCDC58Q4VC31 144 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 PYDC2Q56P42 97 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 MESTQ5EB52 335 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 TPTE2P1Q5T6R2 138 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 NXNL2Q5VZ03 156 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 C12orf73Q69YU5 71 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 SSX9Q7RTT3 188 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 FAM122BQ7Z309 247 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 SLC35E3Q7Z769 313 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 TPRA1Q86W33 373 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 IQCF2Q8IXL9 164 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 YIPF7Q8N8F6 280 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 AQP11Q8NBQ7 271 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 BBS1Q8NFJ9 593 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 OR10Z1Q8NGY1 313 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 OR52N1Q8NH53 320 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 PFN4Q8NHR9 129 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 C15orf40Q8WUR7 153 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ASB13Q8WXK3 278 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 PRRC1Q96M27 445 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 IL4I1Q96RQ9 567 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 TMED9Q9BVK6 235 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 POLR2J3Q9H1A7 115 aaKnown RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ABCG5Q9H222 651 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 NMNAT1Q9HAN9 279 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 ABCB9Q9NP78 766 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 EXOSC4Q9NPD3 245 aaKnown RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 MED9Q9NWA0 146 aa2.74□□□□□ -1.97
VPS13B-208ENST00000521037 TXNL4BQ9NX01 149 aaKnown RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 EXOGQ9Y2C4 368 aaKnown RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 CSDC2Q9Y534 153 aaKnown RBP2.74□□□□□ -1.97
VPS13B-208ENST00000521037 DSCAML1Q8TD84 2053 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 SMCO3A2RU48 225 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 C7orf66A4D0T2 115 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 ACOD1A6NK06 481 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 SMIM1B2RUZ4 78 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 G3V318 75 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 BLOC1S5-TXNDC5H3BN57 136 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 H3BN98 237 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 M0QZK8 103 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 LGALS9O00182 355 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 PLA2G10O15496 165 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CHP2O43745 196 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 SLC22A5O76082 557 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR7A10O76100 309 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NXPH4O95158 308 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CD74P04233 296 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 HMGN1P05114 100 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 FCGR3AP08637 254 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR8U9P0C7N5 309 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF728P0DKX0 622 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CTRB1P17538 263 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 TGFBR1P36897 503 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NUP62P37198 522 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-208ENST00000521037 HTR2BP41595 481 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR12D2P58182 307 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 TAS2R43P59537 309 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 DSTNP60981 165 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 RND3P61587 244 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 LSM6P62312 80 aaKnown RBP2.73□□□□□ -1.97
VPS13B-208ENST00000521037 FAM3AP98173 230 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CYCSP99999 105 aaKnown RBP2.73□□□□□ -1.97
VPS13B-208ENST00000521037 PITPNAQ00169 270 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 DHODHQ02127 395 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 ECH1Q13011 328 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 TP53I3Q53FA7 332 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CLLU1Q5K131 121 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 LINC00242Q5T6M2 205 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 LELP1Q5T871 98 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 PVRIGQ6DKI7 326 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 ZNF613Q6PF04 617 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 PGAP1Q75T13 922 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 UTS2BQ765I0 119 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 HOGA1Q86XE5 327 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 GID4Q8IVV7 300 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 NKAIN4Q8IVV8 208 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 SLC35F2Q8IXU6 374 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 LINC01561Q8N1V8 128 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR52I1Q8NGK6 324 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR5L1Q8NGL2 311 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR6T1Q8NGN1 323 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR13D1Q8NGV5 346 aa2.73□□□□□ -1.97
VPS13B-208ENST00000521037 OR5H6Q8NGV6 325 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms