RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SPIN2AQ99865 258 aa14.07□□□□□ -0.16
SDC2-205ENST00000520233 SPIN2BQ9BPZ2 258 aa14.07□□□□□ -0.16
SDC2-205ENST00000520233 COMMD5Q9GZQ3 224 aa14.07□□□□□ -0.16
SDC2-205ENST00000520233 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.07□□□□□ -0.16
SDC2-205ENST00000520233 OR51B2Q9Y5P1 312 aa14.07□□□□□ -0.16
SDC2-205ENST00000520233 TEX50A0A1B0GTY4 177 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 RBMXL2O75526 392 aaKnown RBP14.06□□□□□ -0.16
SDC2-205ENST00000520233 NDUFA7O95182 113 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 OR2B8PP59922 312 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 AARDQ4LEZ3 155 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 THOC7Q6I9Y2 204 aaKnown RBP14.06□□□□□ -0.16
SDC2-205ENST00000520233 OR5B3Q8NH48 314 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 ARPC1AQ92747 370 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 C16orf95Q9H693 158 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 ZNF257Q9Y2Q1 563 aa14.06□□□□□ -0.16
SDC2-205ENST00000520233 LINC01548A6NM66 108 aa14.05□□□□□ -0.16
SDC2-205ENST00000520233 MPTX1A8MV57 137 aa14.05□□□□□ -0.16
SDC2-205ENST00000520233 CCSO14618 274 aa14.05□□□□□ -0.16
SDC2-205ENST00000520233 RPL27AP46776 148 aaKnown RBP14.05□□□□□ -0.16
SDC2-205ENST00000520233 NDPQ00604 133 aa14.05□□□□□ -0.16
SDC2-205ENST00000520233 C2orf68Q2NKX9 166 aa14.05□□□□□ -0.16
SDC2-205ENST00000520233 ARSJQ5FYB0 599 aaPredicted RBP14.05□□□□□ -0.16
SDC2-205ENST00000520233 SRSF12Q8WXF0 261 aaKnown RBP14.05□□□□□ -0.16
SDC2-205ENST00000520233 QTRT1Q9BXR0 403 aaKnown RBP14.05□□□□□ -0.16
SDC2-205ENST00000520233 CACFD1Q9UGQ2 172 aa14.05□□□□□ -0.16
SDC2-205ENST00000520233 ATP6V0E1O15342 81 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 ST8SIA3O43173 380 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 PITX3O75364 302 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 IGF1P05019 195 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 EGR2P11161 476 aaPredicted RBP14.04□□□□□ -0.16
SDC2-205ENST00000520233 MYOD1P15172 320 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 HSPE1P61604 102 aaKnown RBP14.04□□□□□ -0.16
SDC2-205ENST00000520233 C10orf55Q5SWW7 151 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 GSG1LQ6UXU4 331 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 OR1L8Q8NGR8 309 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 OR52E5Q8NH55 327 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 OR1S1Q8NH92 325 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 OR2T6Q8NHC8 308 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 GRPEL2Q8TAA5 225 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 ABHD5Q8WTS1 349 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 OR10C1Q96KK4 312 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 MED28Q9H204 178 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 PARP11Q9NR21 331 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 ZNF580Q9UK33 172 aa14.04□□□□□ -0.16
SDC2-205ENST00000520233 C13orf42A0A1B0GVH6 325 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 C5orf51A6NDU8 294 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 CGB1A6NKQ9 187 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 FAM25EA8MYX2 175 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 E7EUB6 86 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 AP4M1O00189 453 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 GOSR2O14653 212 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 OPN1MWP04001 364 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 TRAPPC2P0DI81 140 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 TRAPPC2BP0DI82 140 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 OPN1MW2P0DN77 364 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 OPN1MW3P0DN78 364 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 HKR1P10072 659 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 VDAC2P45880 294 aaPredicted RBP14.03□□□□□ -0.16
SDC2-205ENST00000520233 CRIP2P52943 208 aaPredicted RBP14.03□□□□□ -0.16
SDC2-205ENST00000520233 IAH1Q2TAA2 248 aaPredicted RBP14.03□□□□□ -0.16
SDC2-205ENST00000520233 OR5M8Q8NGP6 311 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 SGMS2Q8NHU3 365 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 TAF15Q92804 592 aaKnown RBP eCLIP14.03□□□□□ -0.165e-6■■□□□ 11.4
SDC2-205ENST00000520233 PDCD10Q9BUL8 212 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 NDUFA4L2Q9NRX3 87 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 FBXO7Q9Y3I1 522 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
SDC2-205ENST00000520233 A0A1B0GW64 132 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 IFNA17P01571 189 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 RRAS2P62070 204 aaPredicted RBP14.02□□□□□ -0.17
SDC2-205ENST00000520233 TMEM95Q3KNT9 176 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.17
SDC2-205ENST00000520233 ZBTB8BQ8NAP8 495 aaPredicted RBP14.02□□□□□ -0.17
SDC2-205ENST00000520233 OR4F5Q8NH21 305 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 C2orf50Q96LR7 162 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 TMEM68Q96MH6 324 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 FYTTD1Q96QD9 318 aaKnown RBP14.02□□□□□ -0.17
SDC2-205ENST00000520233 SRSF8Q9BRL6 282 aaKnown RBP14.02□□□□□ -0.17
SDC2-205ENST00000520233 FAM103A1Q9BTL3 118 aaKnown RBP14.02□□□□□ -0.17
SDC2-205ENST00000520233 SERTAD4Q9NUC0 356 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 MGAT4CQ9UBM8 478 aa14.02□□□□□ -0.17
SDC2-205ENST00000520233 TEX22C9J3V5 150 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 FAM90A26D6RGX4 464 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 SPCS3P61009 180 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 PRCDQ00LT1 54 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 TMEM267Q0VDI3 215 aaPredicted RBP14.01□□□□□ -0.17
SDC2-205ENST00000520233 STPG2Q8N412 459 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.01□□□□□ -0.17
SDC2-205ENST00000520233 OR4D5Q8NGN0 318 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 LINC01006Q8NI28 216 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 HSPB7Q9UBY9 170 aa14.01□□□□□ -0.17
SDC2-205ENST00000520233 TRAV41A0A0B4J266 112 aa14□□□□□ -0.17
SDC2-205ENST00000520233 A0A1W2PN81 502 aa14□□□□□ -0.17
SDC2-205ENST00000520233 SIX6O95475 246 aa14□□□□□ -0.17
SDC2-205ENST00000520233 CHRNA7P36544 502 aa14□□□□□ -0.17
SDC2-205ENST00000520233 TNFRSF9Q07011 255 aa14□□□□□ -0.17
SDC2-205ENST00000520233 FCN2Q15485 313 aa14□□□□□ -0.17
SDC2-205ENST00000520233 AKIRIN2Q53H80 203 aa14□□□□□ -0.17
SDC2-205ENST00000520233 C19orf54Q5BKX5 351 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms