RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	SLC25A22	Q9H936	323 aa		10.08	□□□□□ -0.8
SPIDR-210	ENST00000519362	OR51B2	Q9Y5P1	312 aa		10.08	□□□□□ -0.8
SPIDR-210	ENST00000519362	KBTBD11	O94819	623 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	IFNA1	P01562	189 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	CRYBA1	P05813	215 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	FOLR2	P14207	255 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	MYOD1	P15172	320 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	COL8A2	P25067	703 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	NPY1R	P25929	384 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	ZNF137P	P52743	207 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	CEBPG	P53567	150 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	PRCD	Q00LT1	54 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	TMEM177	Q53S58	311 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	SLC35E3	Q7Z769	313 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	RAB24	Q969Q5	203 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	HIST1H2BA	Q96A08	127 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	TMEM186	Q96B77	213 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	C1orf159	Q96HA4	380 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	NIPSNAP3B	Q9BS92	247 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	LSM4	Q9Y4Z0	139 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	RELN	P78509	3460 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	TRBV23-1	A0A0A0MS06	115 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	SEC14L6	B5MCN3	397 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	APOA2	P02652	100 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	MT-ND4L	P03901	98 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	SAA1	P0DJI8	122 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	IGHV1-8	P0DP01	117 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	CTRB1	P17538	263 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	PPOX	P50336	477 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	AVPI1	Q5T686	147 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	CTRB2	Q6GPI1	263 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	RBMS3	Q6XE24	437 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	OR10X1	Q8NGY0	326 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	ISOC2	Q96AB3	205 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	TVP23C	Q96ET8	276 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	MGST2	Q99735	147 aa		10.07	□□□□□ -0.8
SPIDR-210	ENST00000519362	TEX50	A0A1B0GTY4	177 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362		A0A1W2PPE2	198 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	LYNX1	G3V0Z9	82 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	HMGB3	O15347	200 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	ZZEF1	O43149	2961 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	CYB5B	O43169	146 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	CA2	P00918	260 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	IFNA4	P05014	189 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	C1QTNF9	P0C862	333 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	LYNX1	P0DP58	116 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	OPRK1	P41145	380 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	RNF212	Q495C1	297 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	ZNF841	Q6ZN19	808 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	OR9G1	Q8NH87	305 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	NABP2	Q9BQ15	211 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	TMPRSS5	Q9H3S3	457 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	NPVF	Q9HCQ7	196 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	ENY2	Q9NPA8	101 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	FKBP11	Q9NYL4	201 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	MLX	Q9UH92	298 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362	PKDREJ	Q9NTG1	2253 aa		10.06	□□□□□ -0.8
SPIDR-210	ENST00000519362		A0A087WWC5	75 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	SMCO3	A2RU48	225 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	NDUFS6	O75380	124 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	YIF1A	O95070	293 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	IGHV2-70	P01814	119 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	MAS1L	P35410	378 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	CD81	P60033	236 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	MEF2B	Q02080	365 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	DIAPH2-AS1	Q14236	149 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	TMEM249	Q2WGJ8	235 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	OR5B3	Q8NH48	314 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	RAB1C	Q92928	201 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	HARBI1	Q96MB7	349 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	YPEL4	Q96NS1	127 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	PCGF1	Q9BSM1	259 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	GGTLC1	Q9BX51	225 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	PLEKHA3	Q9HB20	300 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	RALY	Q9UKM9	306 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	CACNA1B	Q00975	2339 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362		A0A1W2PPH5	198 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	FNDC10	F2Z333	226 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	DEFA4	P12838	97 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	TAGLN2	P37802	199 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	REG1B	P48304	166 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	CDC34	P49427	236 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	ATP5I	P56385	69 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	BSX	Q3C1V8	233 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	PDPN	Q86YL7	162 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	OR4C13	Q8NGP0	309 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	FLYWCH2	Q96CP2	140 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	TMEM133	Q9H2Q1	129 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	MANBAL	Q9NQG1	85 aa		10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-210	ENST00000519362	GCSAML	Q5JQS6	135 aa		10.04	□□□□□ -0.8
SPIDR-210	ENST00000519362	WDR25	Q64LD2	544 aa	Predicted RBP	10.04	□□□□□ -0.8
SPIDR-210	ENST00000519362	HINT2	Q9BX68	163 aa		10.04	□□□□□ -0.8
SPIDR-210	ENST00000519362	PRORY	Q9H606	182 aa		10.04	□□□□□ -0.8
SPIDR-210	ENST00000519362	PXMP4	Q9Y6I8	212 aa		10.04	□□□□□ -0.8
SPIDR-210	ENST00000519362		B4DEV8	164 aa		10.03	□□□□□ -0.8
SPIDR-210	ENST00000519362	INS-IGF2	F8WCM5	200 aa		10.03	□□□□□ -0.8
SPIDR-210	ENST00000519362	OR2C1	O95371	312 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms