RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HSPB9Q9BQS6 159 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 CHST6Q9GZX3 395 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 CXorf21Q9HAI6 301 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 PXMP4Q9Y6I8 212 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 PLB1Q6P1J6 1458 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 SIPA1L1O43166 1804 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 H0Y980 276 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 H3BT86 120 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 LST1O00453 97 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 MSNP26038 577 aaKnown RBP1.36□□□□□ -2.19
SQLE-202ENST00000518604 RAB13P51153 203 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 EMX1Q04741 257 aaPredicted RBP1.36□□□□□ -2.19
SQLE-202ENST00000518604 C1orf195Q5TG92 126 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 C9orf84Q5VXU9 1444 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 NAV1Q8NEY1 1877 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 MBD3L1Q8WWY6 194 aa1.36□□□□□ -2.19
SQLE-202ENST00000518604 FN1P02751 2386 aaKnown RBP1.36□□□□□ -2.19
SQLE-202ENST00000518604 SCAF11Q99590 1463 aaKnown RBP1.36□□□□□ -2.19
SQLE-202ENST00000518604 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
SQLE-202ENST00000518604 ZFHX2Q9C0A1 2572 aaPredicted RBP1.35□□□□□ -2.19
SQLE-202ENST00000518604 A0A0D9SEW6 157 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 C21orf140B9A014 251 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 AHSA1O95433 338 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 NSA2O95478 260 aaKnown RBP1.35□□□□□ -2.19
SQLE-202ENST00000518604 CSN1S1P47710 185 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 MARCKSL1P49006 195 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 EVX1P49640 407 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 NNATQ16517 81 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 CLVS2Q5SYC1 327 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 SLC36A1Q7Z2H8 476 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 DEFB125Q8N687 156 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 DIRAS2Q96HU8 199 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 ANGPT4Q9Y264 503 aa1.35□□□□□ -2.19
SQLE-202ENST00000518604 FBN3Q75N90 2809 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 SMARCA4P51532 1647 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 TRBV6-5A0A0K0K1A5 114 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 A0A1B0GV50 99 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 OR51F1A6NGY5 319 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 LEPROTO15243 131 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 ACOX3O15254 700 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 C1QAP02745 245 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 SERPINA6P08185 405 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 AP2S1P53680 142 aaPredicted RBP1.34□□□□□ -2.19
SQLE-202ENST00000518604 MAGOHP61326 146 aaKnown RBP1.34□□□□□ -2.19
SQLE-202ENST00000518604 NAA20P61599 178 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 CD200R1LQ6Q8B3 271 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 C7orf65Q6ZTY9 151 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 RPS19BP1Q86WX3 136 aaKnown RBP1.34□□□□□ -2.19
SQLE-202ENST00000518604 ANKRD7Q92527 254 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 RAB8BQ92930 207 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 TESCQ96BS2 214 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 OPTNQ96CV9 577 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 NAT8Q9UHE5 227 aa1.34□□□□□ -2.19
SQLE-202ENST00000518604 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.19
SQLE-202ENST00000518604 CUL9Q8IWT3 2517 aa1.34□□□□□ -2.2
SQLE-202ENST00000518604 DCCP43146 1447 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 MEIS3P1A6NDR6 274 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 NOS1APO75052 506 aaPredicted RBP1.33□□□□□ -2.2
SQLE-202ENST00000518604 ISG15P05161 165 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 SRP19P09132 144 aaKnown RBP1.33□□□□□ -2.2
SQLE-202ENST00000518604 TFPTP0C1Z6 253 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 FGF6P10767 208 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 KCNE1P15382 129 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 AQP4P55087 323 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 OR4D2P58180 307 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 ITGB3BPQ13352 177 aaPredicted RBP1.33□□□□□ -2.2
SQLE-202ENST00000518604 ELOBQ15370 118 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 RGS21Q2M5E4 152 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 DCXRQ7Z4W1 244 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 GPR32P1Q8NGA4 272 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 ACOT12Q8WYK0 555 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 ITFG2Q969R8 447 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 Q96M85 177 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 FAM96AQ9H5X1 160 aa1.33□□□□□ -2.2
SQLE-202ENST00000518604 RP1L1Q8IWN7 2480 aaPredicted RBP1.32□□□□□ -2.2
SQLE-202ENST00000518604 TRAPPC13A5PLN9 417 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 I3L521 148 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 MRPS14O60783 128 aaKnown RBP1.32□□□□□ -2.2
SQLE-202ENST00000518604 CRPP02741 224 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 PPBPP02775 128 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 RPSAP08865 295 aaKnown RBP1.32□□□□□ -2.2
SQLE-202ENST00000518604 NFYAP23511 347 aaPredicted RBP1.32□□□□□ -2.2
SQLE-202ENST00000518604 S100A7P31151 101 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 CCR7P32248 378 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 MAP2K4P45985 399 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 RAB5BP61020 215 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 NDUFA5Q16718 116 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 IMPG1Q17R60 797 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 ARHGAP11BQ3KRB8 267 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 GLT8D1Q68CQ7 371 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 FP248Q71RG6 208 aaPredicted RBP1.32□□□□□ -2.2
SQLE-202ENST00000518604 OR1M1Q8NGA1 313 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 RETNLBQ9BQ08 111 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 MED9Q9NWA0 146 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 TIMM22Q9Y584 194 aa1.32□□□□□ -2.2
SQLE-202ENST00000518604 PRRC2BQ5JSZ5 2229 aaKnown RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 IGKV2-40A0A087WW87 121 aaPredicted RBP1.31□□□□□ -2.2
SQLE-202ENST00000518604 TRBV10-2A0A0K0K1G8 114 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 ORC5O43913 435 aa1.31□□□□□ -2.2
SQLE-202ENST00000518604 DCTN3O75935 186 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms