RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TAS2R30P59541 319 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 CDK5Q00535 292 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 RUNX1Q01196 453 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 CAV1Q03135 178 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 MXD1Q05195 221 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 PRDX4Q13162 271 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 HTR4Q13639 388 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 OR8G1Q15617 311 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 OR8B8Q15620 311 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 NEDD8Q15843 81 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 HSD17B12Q53GQ0 312 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 FAM201AQ5SY85 155 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 STRADAQ7RTN6 431 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF550Q7Z398 422 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 NEGR1Q7Z3B1 354 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 DEFB128Q7Z7B8 93 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 UMODL1-AS1Q8N2C9 162 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 THEM6Q8WUY1 208 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 GALNT14Q96FL9 552 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 REEP6Q96HR9 211 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 GPR82Q96P67 336 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 SPANXDQ9BXN6 97 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 TAF9BQ9HBM6 251 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 CYTL1Q9NRR1 136 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 MRPL16Q9NX20 251 aaKnown RBP2.23□□□□□ -2.05
VPS13B-207ENST00000518569 MED11Q9P086 117 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
VPS13B-207ENST00000518569 TMEM216Q9P0N5 145 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 DEC1Q9P2X7 70 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 VAX2Q9UIW0 290 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 MCTS1Q9ULC4 181 aaKnown RBP2.23□□□□□ -2.05
VPS13B-207ENST00000518569 ZFP30Q9Y2G7 519 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF257Q9Y2Q1 563 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 WASHC3Q9Y3C0 194 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 HES2Q9Y543 173 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 YTHDF2Q9Y5A9 579 aaKnown RBP2.23□□□□□ -2.05
VPS13B-207ENST00000518569 CENPFP49454 3210 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 SCN4AP35499 1836 aa2.23□□□□□ -2.05
VPS13B-207ENST00000518569 MTCL1Q9Y4B5 1905 aaKnown RBP2.23□□□□□ -2.05
VPS13B-207ENST00000518569 FER1L6Q2WGJ9 1857 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 FAM208AQ9UK61 1670 aaKnown RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 PXDNLA1KZ92 1463 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 MEIKINA0A087WXM9 373 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 TRAV8-1A0A0A6YYK1 113 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 H7C1H1 209 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 PIRO00625 290 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 TCF21O43680 179 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 NDUFS5O43920 106 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 PDCD6O75340 191 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF324O75467 553 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 IGLV2-23P01705 113 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 GYPCP04921 128 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 HLA-DQB2P05538 268 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 EIF4EP06730 217 aaKnown RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SOD3P08294 240 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 OR5H8P0DN80 308 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 CXCL2P19875 107 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 PRTN3P24158 256 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 GADD45AP24522 165 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 CXCL5P42830 114 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 REG1BP48304 166 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 RND2P52198 227 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF140P52738 457 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 RPS23P62266 143 aaKnown RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SNRPD2P62316 118 aaKnown RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 HLA-DRB3P79483 266 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 TNFAIP6P98066 277 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 FABP5Q01469 135 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 IL15RAQ13261 267 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 FZD2Q14332 565 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 RGNQ15493 299 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 OCIAD2Q56VL3 154 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 IBA57Q5T440 356 aaKnown RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 LCN12Q6JVE5 192 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 LYPD2Q6UXB3 125 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 CLEC19AQ6UXS0 136 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SMIM5Q71RC9 77 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 PCP2Q8IVA1 136 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 TCTE3Q8IZS6 198 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 OR8I2Q8N0Y5 310 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 ANKRD29Q8N6D5 301 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 KRTCAP2Q8N6L1 136 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF615Q8N8J6 731 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 GPR119Q8TDV5 335 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 ORAOV1Q8WV07 137 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 GEMIN6Q8WXD5 167 aaKnown RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 OR5P3Q8WZ94 311 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 FRZBQ92765 325 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 CLDN23Q96B33 292 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 FAM3DQ96BQ1 224 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SMIM8Q96KF7 97 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 LYSMD1Q96S90 227 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 RTBDNQ9BSG5 229 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 PSMG3Q9BT73 122 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SFXN3Q9BWM7 321 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SAMD10Q9BYL1 202 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 LINC00470Q9BZP3 86 aa2.22□□□□□ -2.05
VPS13B-207ENST00000518569 SLIRPQ9GZT3 109 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms