RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PHLDA2Q53GA4 152 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF766Q5HY98 468 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 STPG1Q5TH74 334 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 Q6AWC8 147 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 CDC42EP5Q6NZY7 148 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 SPATA12Q7Z6I5 190 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 MOGAT3Q86VF5 341 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF695Q8IW36 515 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 YAF2Q8IY57 180 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 GVQW1Q8N7I0 195 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNRF2Q8NHG8 242 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 GTSF1Q8WW33 167 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 PPDPFLQ8WWR9 84 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM190Q8WZ59 177 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 RAB37Q96AX2 223 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 LINC00615Q96LM1 132 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 GPX7Q96SL4 187 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 NMNAT3Q96T66 252 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ASCL2Q99929 193 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 LINC00597Q9H2U6 94 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 C11orf1Q9H5F2 150 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 WSB2Q9NYS7 404 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 B4GALT7Q9UBV7 327 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 TNRC6AQ8NDV7 1962 aaKnown RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 LCTP09848 1927 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 IGLV3-16A0A075B6K0 115 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 MYADML2A6NDP7 307 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 C2orf70A6NJV1 201 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 C11orf94C9JXX5 98 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 F5H768 121 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 LEPROTL1O95214 131 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 MT-CO3P00414 261 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 IGHV3-7P01780 117 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 HMGN2P05204 90 aaKnown RBP4□□□□□ -1.77
HMGB1P19-201ENST00000517578 GYPBP06028 91 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 RHOCP08134 193 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 IFI6P09912 130 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 PIRTP0C851 137 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 PVRP15151 417 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 CBLN1P23435 193 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 LMO2P25791 158 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 NCBP2P52298 156 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF136P52737 540 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 EFNB3Q15768 340 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 CLEC12BQ2HXU8 276 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 C1orf140Q5VVS0 124 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 ASPHD2Q6ICH7 369 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 Q6ZS49 121 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 Q6ZVL8 140 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 OOSP2Q86WS3 158 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM219Q86XT9 240 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 MMD2Q8IY49 270 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF611Q8N823 705 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 CDRT4Q8N9R6 151 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 VN1R2Q8NFZ6 395 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR2T6Q8NHC8 308 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 RPEQ96AT9 228 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 CLDN23Q96B33 292 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 RNF125Q96EQ8 232 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRSS27Q9BQR3 290 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 C19orf24Q9BVV8 132 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM59Q9BXS4 323 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 PDFQ9HBH1 243 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 BPIFA1Q9NP55 256 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 OBP2BQ9NPH6 170 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRTFDC1Q9NRG1 225 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 OSTCQ9NRP0 149 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM160Q9NX00 188 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 LOXL2Q9Y4K0 774 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 UBR3Q6ZT12 1888 aa4□□□□□ -1.77
HMGB1P19-201ENST00000517578 KMT2EQ8IZD2 1858 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1B0GWB2 263 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 C17orf102A2RUQ5 167 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 WIPF3A6NGB9 483 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 VWC2LB2RUY7 222 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 GGTLC3B5MD39 225 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 FAM90A26D6RGX4 464 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 TNFSF11O14788 317 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRKNO60260 465 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 NEURL1O76050 574 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 CRYAAP02489 173 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 SP1P08047 785 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 SRIP30626 198 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 CFHR2P36980 270 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 HERV-K104P61576 105 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 RHOAP61586 193 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 QRFPP83859 136 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 TNFAIP6P98066 277 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 POU3F1Q03052 451 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 TLE1Q04724 770 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 MALLQ13021 153 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 WDR38Q5JTN6 314 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 MBNL2Q5VZF2 373 aaKnown RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 CBLN3Q6UW01 205 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 PQLC2Q6ZP29 291 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATP5L2Q7Z4Y8 100 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms