RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 FGF2P09038 288 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 PSMB9P28065 219 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CATR1Q13166 79 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 UBE2UQ5VVX9 321 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SFXN4Q6P4A7 337 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SSX9Q7RTT3 188 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 UXS1Q8NBZ7 420 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 OR13F1Q8NGS4 319 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 HRASLSQ9HDD0 168 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 MLXQ9UH92 298 aa10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 RRP15Q9Y3B9 282 aaKnown RBP10.95□□□□□ -0.66
SCARNA20.5-201ENST00000516991 LOC102724200A0A096LPH7 203 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ELLP55199 621 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TAS2R31P59538 309 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 POU2AF1Q16633 256 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 THOC7Q6I9Y2 204 aaKnown RBP10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 BTNL8Q6UX41 500 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SPAG16Q8N0X2 631 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 BEST4Q8NFU0 473 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 THYN1Q9P016 225 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 RAB26Q9ULW5 256 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SSR3Q9UNL2 185 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 UFC1Q9Y3C8 167 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 S4R3C0 116 aa10.94□□□□□ -0.66
SCARNA20.5-201ENST00000516991 A0A0A6YYH2 397 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 MFSD2BA6NFX1 497 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 A6NJ64 397 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SCAF4O95104 1147 aaKnown RBP10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 PPYP01298 95 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 REG1AP05451 166 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 MYOD1P15172 320 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 FCGR2CP31995 323 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 OR2B8PP59922 312 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 RBPMS2Q6ZRY4 209 aaKnown RBP10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 OR1L6Q8NGR2 347 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 BORCS5Q969J3 196 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 MRPL27Q9P0M9 148 aaKnown RBP10.93□□□□□ -0.66
SCARNA20.5-201ENST00000516991 IGLC7A0M8Q6 106 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CGB1A6NKQ9 187 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TNFSF12O43508 249 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 HPRT1P00492 218 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CLEC3BP05452 202 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 C8orf88P0DMB2 117 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 NQO2P16083 231 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 GPR183P32249 361 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 HOGA1Q86XE5 327 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SLC38A6Q8IZM9 456 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CD300LFQ8TDQ1 290 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 GPHA2Q96T91 129 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SPAG8Q99932 426 aaPredicted RBP10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 QTRT1Q9BXR0 403 aaKnown RBP10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SLC5A7Q9GZV3 580 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CCL28Q9NRJ3 127 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 COMMD9Q9P000 198 aa10.92□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ALMS1Q8TCU4 4167 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 UPK2O00526 184 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 PTBP1P26599 531 aaKnown RBP eCLIP10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CBX5P45973 191 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 APOC4P55056 127 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 PLET1Q6UQ28 207 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 UNQ9165/PRO28630Q6UXU0 137 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 HSD17B13Q7Z5P4 300 aaPredicted RBP10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SPARTQ8N0X7 666 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 VN1R17PQ8TDU5 208 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SLC25A38Q96DW6 304 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ZNF436Q9C0F3 470 aaPredicted RBP10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 C5orf66Q9H5L9 145 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 PLEKHA2Q9HB19 425 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TP53TG1Q9Y2A0 90 aa10.91□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TRAV18A0A075B6X5 111 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SULT1C2O00338 296 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SDC2P34741 201 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 HERV-K104P61576 105 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ERVK-16P61578 105 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ZNF585BQ52M93 769 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 WFDC3Q8IUB2 231 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 OR2C3Q8N628 320 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 GVQW1Q8N7I0 195 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 DMBX1Q8NFW5 382 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TMEM190Q8WZ59 177 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 LINC00476Q8WZB0 136 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 ATP6V0BQ99437 205 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 TMEM140Q9NV12 185 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 SELENOKQ9Y6D0 94 aa10.9□□□□□ -0.66
SCARNA20.5-201ENST00000516991 CXorf65A6NEN9 183 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 NUPR2A6NF83 97 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 UBE2CO00762 179 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 TGOLN2O43493 480 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 TMEM127O75204 238 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 FXYD4P59646 89 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 AADACL3Q5VUY0 350 aa10.89□□□□□ -0.67
SCARNA20.5-201ENST00000516991 SPSB3Q6PJ21 355 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms