RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SSX2Q16385 188 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 EIF5AL1Q6IS14 154 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM14EPQ6UXP3 125 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM217Q8N7C4 229 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LINC01356Q8N9X3 169 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TEX45Q8NA69 505 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UBAC2Q8NBM4 344 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CFHR4Q92496 578 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MALSU1Q96EH3 234 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 C1orf159Q96HA4 380 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HINT2Q9BX68 163 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 COMMD5Q9GZQ3 224 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 WFDC1Q9HC57 220 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ENY2Q9NPA8 101 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 AUP1Q9Y679 476 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MAP1AP78559 2803 aaPredicted RBP6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NAV2Q8IVL1 2488 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 A0A096LNT2 108 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGHV1-69DA0A0B4J2H0 117 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CENPVL3A0A0U1RRI6 287 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TEX50A0A1B0GTY4 177 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 DFFBO76075 338 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ACTL6BO94805 426 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 VENTXO95231 258 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGHV1-69P01742 117 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MYOD1P15172 320 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 GATA3P23771 443 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SAA4P35542 130 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 HTR2BP41595 481 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 VDAC2P45880 294 aaPredicted RBP6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 F2RL1P55085 397 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PRCDQ00LT1 54 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 HES1Q14469 280 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PSG5Q15238 335 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NDUFA5Q16718 116 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CLLU1Q5K131 121 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PRSS57Q6UWY2 283 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MMD2Q8IY49 270 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 STPG2Q8N412 459 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR1L8Q8NGR8 309 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR2T10Q8NGZ9 312 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR5B3Q8NH48 314 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RITA1Q96K30 269 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR4C12Q96R67 309 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ATP5SQ99766 215 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 REG4Q9BYZ8 158 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C7orf69Q9H7B7 122 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ZNF430Q9H8G1 570 aaPredicted RBP6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PLEKHA3Q9HB20 300 aa6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 METTL1Q9UBP6 276 aaKnown RBP6.14□□□□□ -1.43
SCARNA20.1-201ENST00000516009 VPS13CQ709C8 3753 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TRAV40A0A0B4J280 105 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RNF223E7ERA6 249 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MOSP00540 346 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IFNA10P01566 189 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IFNA5P01569 189 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGKV1D-33P01593 117 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGKV1-33P01594 117 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OPN1MWP04001 364 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CRYGBP07316 175 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SNRNP70P08621 437 aaKnown RBP6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR8U8P0C7N1 319 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OPN1MW2P0DN77 364 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OPN1MW3P0DN78 364 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PAX6P26367 422 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CNTFRP26992 372 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 BRS3P32247 399 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MAS1LP35410 378 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RAB11AP62491 216 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SLC38A11Q08AI6 406 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 HNF4GQ14541 408 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PLGLAQ15195 96 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PRSS8Q16651 343 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR8G2PQ6IF36 304 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SLC25A24Q6NUK1 477 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 HAPLN4Q86UW8 402 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PPP1R27Q86WC6 154 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 DYNAPQ8N1N2 210 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 LILRB2Q8N423 598 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SLC24A4Q8NFF2 622 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR10P1Q8NGE3 313 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TMED6Q8WW62 240 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PINX1Q96BK5 328 aaKnown RBP6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 EAF1Q96JC9 268 aaPredicted RBP6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 Q96MF0 132 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 GINS3Q9BRX5 216 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ARV1Q9H2C2 271 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 HIF1ANQ9NWT6 349 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 KIAA1456Q9P272 454 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SIGLEC9Q9Y336 463 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PLXNB1O43157 2135 aa6.13□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGHV3OR16-10A0A075B7F0 116 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 A0A1W2PN81 502 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RPS10-NUDT3A0A1W2PQS6 291 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C15orf62A8K5M9 175 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PMS2P5A8MQ11 134 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 J3QLI3 93 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RRHO14718 337 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NBR2O15453 112 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms