RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	FLYWCH2	Q96CP2	140 aa	Known RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PSMG3	Q9BT73	122 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	WDR61	Q9GZS3	305 aa	Known RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SH3BGRL3	Q9H299	93 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HIPK2	Q9H2X6	1198 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	UNKL	Q9H9P5	680 aa	Known RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MMP26	Q9NRE1	261 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	NUP50	Q9UKX7	468 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PRND	Q9UKY0	176 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TCF19	Q9Y242	345 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ZNF257	Q9Y2Q1	563 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	WASHC3	Q9Y3C0	194 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RFNG	Q9Y644	331 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DSCAML1	Q8TD84	2053 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGHV1-3	A0A0C4DH29	117 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TEX50	A0A1B0GTY4	177 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ODF3B	A8MYP8	253 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PRSS46	E5RG02	174 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	INS-IGF2	F8WCM5	200 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854		H7C2Y5	167 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RRH	O14718	337 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ENSA	O43768	121 aa	Known RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CRYGB	P07316	175 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MYOD1	P15172	320 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ZP3	P21754	424 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	USF1	P22415	310 aa	Predicted RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	COX7A1	P24310	79 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ZFP36	P26651	326 aa	Known RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CAMLG	P49069	296 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PDLIM4	P50479	330 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	F2RL1	P55085	397 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DLX1	P56177	255 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ATP5I	P56385	69 aa	Predicted RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RPS16	P62249	146 aa	Known RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ARF6	P62330	175 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SERF2	P84101	59 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PRCD	Q00LT1	54 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RUNX1	Q01196	453 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MRGPRG-AS1	Q2M3A8	158 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TPTE2P1	Q5T6R2	138 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR8G2P	Q6IF36	304 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DPPA3	Q6W0C5	159 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	THNSL2	Q86YJ6	484 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PNKD	Q8N490	385 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	COMMD1	Q8N668	190 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TEX45	Q8NA69	505 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR5B3	Q8NH48	314 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CLDND2	Q8NHS1	167 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	VSTM2A	Q8TAG5	236 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SCGB1C1	Q8TD33	95 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM170A	Q8WVE7	144 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TAF15	Q92804	592 aa	Known RBP eCLIP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RBMXL1	Q96E39	390 aa	Known RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HARBI1	Q96MB7	349 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LINC00052	Q96N35	136 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CLCC1	Q96S66	551 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CCL19	Q99731	98 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RNF5	Q99942	180 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM147	Q9BVK8	224 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	GGACT	Q9BVM4	153 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SIRPD	Q9H106	197 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HRH4	Q9H3N8	390 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	NARFL	Q9H6Q4	476 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HEYL	Q9NQ87	328 aa	Predicted RBP	3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	UQCC1	Q9NVA1	299 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	FKBP11	Q9NYL4	201 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ONECUT1	Q9UBC0	465 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TIMM9	Q9Y5J7	89 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR51B2	Q9Y5P1	312 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	INSIG2	Q9Y5U4	225 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	KPTN	Q9Y664	436 aa		3.62	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ICE1	Q9Y2F5	2266 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGSF10	Q6WRI0	2623 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGHV2-70D	A0A0C4DH43	119 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854		A0A1B0GW64	132 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854		A0A1W2PPI3	338 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM218	A2RU14	115 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CGB1	A6NKQ9	187 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OOSP1	A8MZH6	123 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	VWC2L	B2RUY7	222 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	FNDC10	F2Z333	226 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854		F8W735	103 aa	Predicted RBP	3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RNASEK-C17orf49	H0YIS7	233 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	NDUFS8	O00217	210 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TSPAN15	O95858	294 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IFNA10	P01566	189 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PRH1	P02810	166 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CD5	P06127	495 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PAX1	P15863	534 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	NPY1R	P25929	384 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HTR1D	P28221	377 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CD1B	P29016	333 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SNCA	P37840	140 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CEACAM3	P40198	252 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HOXA1	P49639	335 aa	Predicted RBP	3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	FHIT	P49789	147 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RAB11A	P62491	216 aa		3.61	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RPL8	P62917	257 aa	Known RBP	3.61	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms