RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 FAM19A3Q7Z5A8 133 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 DPPA2Q7Z7J5 298 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 SLC51BQ86UW2 128 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 GID4Q8IVV7 300 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 ZNF101Q8IZC7 436 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 ZFP82Q8N141 532 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 TBC1D19Q8N5T2 526 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 NATD1Q8N6N6 113 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 SPANXA2-OT1Q8N9U9 137 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 MFSD8Q8NHS3 518 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 ITLN2Q8WWU7 325 aaPredicted RBP1.91□□□□□ -2.1
HERC4-215ENST00000515753 ASB17Q8WXJ9 295 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 GALMQ96C23 342 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 L3HYPDHQ96EM0 354 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 TRIB3Q96RU7 358 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 PEBP4Q96S96 227 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 EBNA1BP2Q99848 306 aaKnown RBP1.91□□□□□ -2.1
HERC4-215ENST00000515753 SELENOSQ9BQE4 189 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 MARVELD1Q9BSK0 173 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 MS4A8Q9BY19 250 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 HES4Q9HCC6 221 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 LINC00527Q9UJ94 153 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 DKKL1Q9UK85 242 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 YTHDF2Q9Y5A9 579 aaKnown RBP1.91□□□□□ -2.1
HERC4-215ENST00000515753 HEY1Q9Y5J3 304 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 CFAP47Q6ZTR5 3102 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 DMXL1Q9Y485 3027 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 CACNA1EQ15878 2313 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 SDK1Q7Z5N4 2213 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 TRIOO75962 3097 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 ANKRD12Q6UB98 2062 aa1.9□□□□□ -2.1
HERC4-215ENST00000515753 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.1
HERC4-215ENST00000515753 FASNP49327 2511 aaKnown RBP1.9□□□□□ -2.1
HERC4-215ENST00000515753 KIAA1549LQ6ZVL6 1849 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 TNRC6BQ9UPQ9 1833 aaKnown RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 IGLV3-12A0A075B6K2 115 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 SPRR5A0A1B0GTR4 108 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 BTNL10A8MVZ5 291 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 APOC4-APOC2K7ER74 178 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 BET1O15155 118 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 MFSD11O43934 449 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 CST8O60676 142 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 CDRT1O95170 752 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 IGHV1-46P01743 117 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 APOC2P02655 101 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 ADRA2AP08913 450 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 PTHLHP12272 177 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 GABRA1P14867 456 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 ALOX5APP20292 161 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 CMPK1P30085 196 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 CCR7P32248 378 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 PMELP40967 661 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 GABRA4P48169 554 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 CMC4P56277 68 aaPredicted RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 RAB5BP61020 215 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 NAA20P61599 178 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 RANP62826 216 aaKnown RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 ELF3P78545 371 aaPredicted RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 HPCAP84074 193 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 GLO1Q04760 184 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 MMDQ15546 238 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 LRRC75BQ2VPJ9 315 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 KLHL12Q53G59 568 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 SPIN3Q5JUX0 258 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 ZNF678Q5SXM1 525 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 SCIMPQ6UWF3 145 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 C4orf22Q6V702 233 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 Q6ZRU5 148 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 NAA40Q86UY6 237 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 SAXO1Q8IYX7 474 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 OR11G2Q8NGC1 345 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 OR9I1Q8NGQ6 314 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 OR1P1Q8NH06 330 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 YIPF5Q969M3 257 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 GPR82Q96P67 336 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 RNF5Q99942 180 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 PCBD2Q9H0N5 130 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 VCX3BQ9H321 246 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 OR51I2Q9H344 312 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 ZNF430Q9H8G1 570 aaPredicted RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 DHCR7Q9UBM7 475 aaKnown RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 VPS29Q9UBQ0 182 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 ZNF835Q9Y2P0 537 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 SAMHD1Q9Y3Z3 626 aaKnown RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 PCYT1BQ9Y5K3 369 aaPredicted RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 RFNGQ9Y644 331 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 VPS13AQ96RL7 3174 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 NUP214P35658 2090 aaPredicted RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 TRIP11Q15643 1979 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 APC2O95996 2303 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 SPAG17Q6Q759 2223 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 ASXL3Q9C0F0 2248 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 MUC22E2RYF6 1773 aaPredicted RBP1.9□□□□□ -2.11
HERC4-215ENST00000515753 NUP205Q92621 2012 aa1.9□□□□□ -2.11
HERC4-215ENST00000515753 PLXNB3Q9ULL4 1909 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 SVILO95425 2214 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 IGF2RP11717 2491 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 TRAV8-1A0A0A6YYK1 113 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 IGHV3-43A0A0B4J1X8 118 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms