RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 BMI1P35226 326 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 ZNF585BQ52M93 769 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 SSX9Q7RTT3 188 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 OR2C3Q8N628 320 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 OR1L6Q8NGR2 347 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 NUDCD2Q8WVJ2 157 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 C5orf66Q9H5L9 145 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 THYN1Q9P016 225 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 A0A0J9YWU9 116 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 CXorf65A6NEN9 183 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 NOTOA8MTQ0 251 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 RBFOX2O43251 390 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDR1-278ENST00000515233 SSX5O60225 188 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 REG1AP05451 166 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 FGF2P09038 288 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 MYOD1P15172 320 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 PTBP1P26599 531 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDR1-278ENST00000515233 OR2B8PP59922 312 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 TIMM50Q3ZCQ8 353 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 C22orf42Q6IC83 251 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 SLC38A6Q8IZM9 456 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 ZNF502Q8TBZ5 544 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 SPAG8Q99932 426 aaPredicted RBP11.18□□□□□ -0.62
DDR1-278ENST00000515233 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
DDR1-278ENST00000515233 ZNF436Q9C0F3 470 aaPredicted RBP11.18□□□□□ -0.62
DDR1-278ENST00000515233 UFC1Q9Y3C8 167 aa11.18□□□□□ -0.62
DDR1-278ENST00000515233 UBE2CO00762 179 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 SPRY2O43597 315 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 FGF9P31371 208 aaPredicted RBP11.17□□□□□ -0.62
DDR1-278ENST00000515233 APOC4P55056 127 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 TAS2R31P59538 309 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 GNG2P59768 71 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 EWSR1Q01844 656 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDR1-278ENST00000515233 POU2AF1Q16633 256 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 CEMP1Q6PRD7 247 aaPredicted RBP11.17□□□□□ -0.62
DDR1-278ENST00000515233 PLET1Q6UQ28 207 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 LYG2Q86SG7 212 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 SPAG16Q8N0X2 631 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 GPHA2Q96T91 129 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 CCL28Q9NRJ3 127 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 BLOC1S6Q9UL45 172 aa11.17□□□□□ -0.62
DDR1-278ENST00000515233 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 TSPAN4O14817 238 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 HPRT1P00492 218 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 GPR183P32249 361 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 PMS2P11Q13670 270 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 TPRA1Q86W33 373 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 KIR2DL5BQ8NHK3 375 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 VN1R17PQ8TDU5 208 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 SECTM1Q8WVN6 248 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 HRASLSQ9HDD0 168 aa11.16□□□□□ -0.62
DDR1-278ENST00000515233 TXNL4BQ9NX01 149 aaKnown RBP11.16□□□□□ -0.62
DDR1-278ENST00000515233 SMIM30A4D0T7 59 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 UPK2O00526 184 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 TNFSF12O43508 249 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 NQO2P16083 231 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 FCGR2CP31995 323 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 ZNF773Q6PK81 442 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 BEST4Q8NFU0 473 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 RNF183Q96D59 192 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 COMMD5Q9GZQ3 224 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 FRAS1Q86XX4 4008 aa11.15□□□□□ -0.62
DDR1-278ENST00000515233 TRAV3A0A0B4J244 114 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 IGHV3-35A0A0C4DH35 117 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 ANKRD65E5RJM6 399 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 CYB5BO43169 146 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 TGOLN2O43493 480 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 MRPS14O60783 128 aaKnown RBP11.14□□□□□ -0.63
DDR1-278ENST00000515233 PPYP01298 95 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 ARPC4P59998 168 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 CATR1Q13166 79 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 THOC7Q6I9Y2 204 aaKnown RBP11.14□□□□□ -0.63
DDR1-278ENST00000515233 HOGA1Q86XE5 327 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 OR13F1Q8NGS4 319 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 TMEM190Q8WZ59 177 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
DDR1-278ENST00000515233 DAPK2Q9UIK4 370 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
DDR1-278ENST00000515233 KMT2AQ03164 3969 aa11.14□□□□□ -0.63
DDR1-278ENST00000515233 SERPINE2P07093 398 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 SCAND1P57086 179 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 DEFB135Q30KP9 77 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 UBE2UQ5VVX9 321 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 LAMTOR1Q6IAA8 161 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 SPSB3Q6PJ21 355 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
DDR1-278ENST00000515233 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 CD300LFQ8TDQ1 290 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 GIMAP1Q8WWP7 306 aa11.13□□□□□ -0.63
DDR1-278ENST00000515233 BSCL2Q96G97 398 aaPredicted RBP11.13□□□□□ -0.63
DDR1-278ENST00000515233 QTRT1Q9BXR0 403 aaKnown RBP11.13□□□□□ -0.63
DDR1-278ENST00000515233 SLC5A7Q9GZV3 580 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms