RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 OR52E5Q8NH55 327 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 C16orf95Q9H693 158 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 TRAV3A0A0B4J244 114 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 FAM90A26D6RGX4 464 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 CA2P00918 260 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 IGF1P05019 195 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 BLCAPP62952 87 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 CX3CL1P78423 397 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 PJVKQ0ZLH3 352 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 Q6ZRM9 215 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 OR4A16Q8NH70 328 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 RNASE11Q8TAA1 199 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 DUX5Q96PT3 197 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 ZNF702PQ9H963 129 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 TNFRSF19Q9NS68 423 aa9.47□□□□□ -0.89
PDLIM5-220ENST00000514830 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 ADAP1O75689 374 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 CRYBA1P05813 215 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 HOXB5P09067 269 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 OR2B8PP59922 312 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 HSPE1P61604 102 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 SRSF4Q08170 494 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 HSD17B13Q7Z5P4 300 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 OR5M8Q8NGP6 311 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 OR1L8Q8NGR8 309 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 ASB13Q8WXK3 278 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 HSPB9Q9BQS6 159 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 COMMD5Q9GZQ3 224 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 CACNG5Q9UF02 275 aa9.46□□□□□ -0.9
PDLIM5-220ENST00000514830 TEX50A0A1B0GTY4 177 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 AP4M1O00189 453 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 SSNA1O43805 119 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 ACTL6BO94805 426 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 SPCS3P61009 180 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 RRAS2P62070 204 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 PRCDQ00LT1 54 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 IL15RAQ13261 267 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 FXYD3Q14802 87 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 TNXAQ16473 311 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 IZUMO4Q1ZYL8 232 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 C2orf68Q2NKX9 166 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 C19orf54Q5BKX5 351 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 GSG1LQ6UXU4 331 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 Q6ZSV7 163 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 SLC35E3Q7Z769 313 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 SGMS2Q8NHU3 365 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 SRSF12Q8WXF0 261 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 OR10C1Q96KK4 312 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 MED28Q9H204 178 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 NDUFA4L2Q9NRX3 87 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 HSPB7Q9UBY9 170 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 OR51B2Q9Y5P1 312 aa9.45□□□□□ -0.9
PDLIM5-220ENST00000514830 CGB1A6NKQ9 187 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 MPTX1A8MV57 137 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 ST8SIA3O43173 380 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 CNIH1O95406 144 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 BRI3O95415 125 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 LY86O95711 162 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 HKR1P10072 659 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 CYCSP99999 105 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 NDPQ00604 133 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 ID3Q02535 119 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 IAH1Q2TAA2 248 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 AKIRIN2Q53H80 203 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 Q6ZS46 218 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 ZBTB8BQ8NAP8 495 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 UXS1Q8NBZ7 420 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 C2orf50Q96LR7 162 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 FYTTD1Q96QD9 318 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 CLCC1Q96S66 551 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 GON7Q9BXV9 100 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 NMES1Q9C002 83 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 SERTAD4Q9NUC0 356 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 KLK9Q9UKQ9 250 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 NSG2Q9Y328 171 aa9.44□□□□□ -0.9
PDLIM5-220ENST00000514830 A0A1B0GUS0 222 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 A0A1B0GW64 132 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 ATP6V0E1O15342 81 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 TRAPPC2P0DI81 140 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 TRAPPC2BP0DI82 140 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 TNFRSF9Q07011 255 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 TMEM267Q0VDI3 215 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 OR4F5Q8NH21 305 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 OR1S1Q8NH92 325 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 OR2T6Q8NHC8 308 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms