RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 NDUFB8O95169 186 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 DHFRP00374 187 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 EIF4EP06730 217 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 HIST1H1BP16401 226 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 RFX2P48378 723 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 TAS2R46P59540 309 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 OR2B8PP59922 312 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 NCS1P62166 190 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 AADACL3Q5VUY0 350 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 CD300LFQ8TDQ1 290 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 ZNF2Q9BSG1 426 aaPredicted RBP7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 FUNDC2Q9BWH2 189 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 ZMAT4Q9H898 229 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 PLEKHA2Q9HB19 425 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 HRASLSQ9HDD0 168 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 TMEM140Q9NV12 185 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 CSMD3Q7Z407 3707 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 TRAV3A0A0B4J244 114 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 IGLC7A0M8Q6 106 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 MARCH11A6NNE9 402 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 C3orf84H3BNL1 204 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 LGALS9O00182 355 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 GGCTO75223 188 aaKnown RBP7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 PMP2P02689 132 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 RLN1P04808 185 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 REG1AP05451 166 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 PRSS3P35030 304 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 GTSCR1Q86UQ5 136 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 OR5H2Q8NGV7 314 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 GPX8Q8TED1 209 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 CMTM3Q96MX0 182 aa7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 SRSF8Q9BRL6 282 aaKnown RBP7.92□□□□□ -1.14
HMGXB3-205ENST00000514469 LYSTQ99698 3801 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 MFSD2BA6NFX1 497 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 C2orf70A6NJV1 201 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 A8MWP6 167 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 PGLYRP1O75594 196 aaPredicted RBP7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 IGHV3-23P01764 117 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 HLA-AP01891 365 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 APOA1P02647 267 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 EDN2P20800 178 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 F2RP25116 425 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 HRH1P35367 487 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 ARL3P36405 182 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 VBP1P61758 197 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 CD300EQ496F6 205 aaPredicted RBP7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 THOC7Q6I9Y2 204 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 CLEC19AQ6UXS0 136 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 GPHB5Q86YW7 130 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 LYSMD2Q8IV50 215 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 LAX1Q8IWV1 398 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 CADM3Q8N126 398 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 DMBX1Q8NFW5 382 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 MUC7Q8TAX7 377 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 EEF1AKMT3Q96AZ1 226 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 QTRT1Q9BXR0 403 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 COMMD5Q9GZQ3 224 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 SCPEP1Q9HB40 452 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 ZC4H2Q9NQZ6 224 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 COMMD3Q9UBI1 195 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 S4R3C0 116 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 STARD9Q9P2P6 4700 aa7.91□□□□□ -1.14
HMGXB3-205ENST00000514469 TRBV7-1A0A0A6YYK4 115 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 GPR31O00270 319 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 GABARAPO95166 117 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 OR2C1O95371 312 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 SMIM18P0DKX4 95 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 DEFA4P12838 97 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 FOLR2P14207 255 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 HLA-DMAP28067 261 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 RCVRNP35243 200 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 ERVK-16P61578 105 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 HSD17B13Q7Z5P4 300 aaPredicted RBP7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 CMTM1Q8IZ96 169 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 OR6F1Q8NGZ6 308 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 DGCR14Q96DF8 476 aaKnown RBP7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 CXorf58Q96LI9 332 aa7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 TECRQ9NZ01 308 aaKnown RBP7.9□□□□□ -1.14
HMGXB3-205ENST00000514469 RYR2Q92736 4967 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 TEX50A0A1B0GTY4 177 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 SMIM31A0A1B0GVY4 71 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 TMEM213A2RRL7 107 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF785A8K8V0 405 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 HPGDSO60760 199 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 RPA2P15927 270 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 ELK1P19419 428 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 LPAR6P43657 344 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 CD81P60033 236 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 WT1-ASQ06250 92 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 HAGHQ16775 308 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF585BQ52M93 769 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 SNX29P2Q8IUI4 249 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 GDPD1Q8N9F7 314 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 OR10W1Q8NGF6 305 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 FCAMRQ8WWV6 532 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 CACNG8Q8WXS5 425 aa7.89□□□□□ -1.15
HMGXB3-205ENST00000514469 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms