RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 HIPK2Q9H2X6 1198 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 HEATR1Q9H583 2144 aaKnown RBP10.45□□□□□ -0.74
SDHA-216ENST00000514027 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.45□□□□□ -0.74
SDHA-216ENST00000514027 EP300Q09472 2414 aaPredicted RBP10.45□□□□□ -0.74
SDHA-216ENST00000514027 CACNA1HO95180 2353 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 USF3Q68DE3 2245 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 C1QTNF9BB2RNN3 333 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 HRASP01112 189 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 IGHV3-13P01766 116 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 IGHV3-7P01780 117 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 CD33P20138 364 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 ZNF83P51522 516 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 BRWD1-AS2P59051 145 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 LDLRAD2Q5SZI1 272 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 IGFL2Q6UWQ7 119 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 TMEM14EPQ6UXP3 125 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 Q6ZVH6 145 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 OR5B12Q96R08 314 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 CISD1Q9NZ45 108 aaKnown RBP10.45□□□□□ -0.74
SDHA-216ENST00000514027 OR6C3Q9NZP0 311 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 SLC45A2Q9UMX9 530 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
SDHA-216ENST00000514027 IGHV3OR15-7A0A075B7D8 119 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 A0A1B0GUS0 222 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 SPINT2O43291 252 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 NUPR1O60356 82 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 EGR1P18146 543 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 EIF4EBP1Q13541 118 aaPredicted RBP10.44□□□□□ -0.74
SDHA-216ENST00000514027 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 CISD2Q8N5K1 135 aaKnown RBP10.44□□□□□ -0.74
SDHA-216ENST00000514027 FAM169BQ8N8A8 192 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 RPUSD4Q96CM3 377 aaKnown RBP10.44□□□□□ -0.74
SDHA-216ENST00000514027 STARD4Q96DR4 205 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 TAAR6Q96RI8 345 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 SLC25A22Q9H936 323 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 ZNF71Q9NQZ8 489 aaPredicted RBP10.44□□□□□ -0.74
SDHA-216ENST00000514027 SLC39A9Q9NUM3 307 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 LAMTOR2Q9Y2Q5 125 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 DOCK11Q5JSL3 2073 aa10.44□□□□□ -0.74
SDHA-216ENST00000514027 M0R1B8 84 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 CLDN14O95500 239 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 IGLV1-44P01699 117 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 TYMSP04818 313 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 PRDX2P32119 198 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 ADIRFQ15847 76 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 MBNL2Q5VZF2 373 aaKnown RBP10.43□□□□□ -0.74
SDHA-216ENST00000514027 UNQ5815/PRO19632Q6UWF5 114 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 MBD3L1Q8WWY6 194 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 LHX4Q969G2 390 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 PINX1Q96BK5 328 aaKnown RBP10.43□□□□□ -0.74
SDHA-216ENST00000514027 TUBG2Q9NRH3 451 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 GNG12Q9UBI6 72 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 DKK4Q9UBT3 224 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 ZNF320A2RRD8 509 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 AHRRA9YTQ3 701 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 H7BYZ3 331 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 MMP23AO75900 390 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 IFNA1P01562 189 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 P0C879 139 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 CDKN1AP38936 164 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 TFF3Q07654 80 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 OR10P1Q8NGE3 313 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 OR4B1Q8NGF8 309 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 SMIM12Q96EX1 92 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 TMEM147Q9BVK8 224 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 CACNA1GO43497 2377 aa10.43□□□□□ -0.74
SDHA-216ENST00000514027 ZNF737O75373 536 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 GPR12P47775 334 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 EDDM3BP56851 147 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 MSMPQ1L6U9 139 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 ACSM6Q6P461 480 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 RPP25LQ8N5L8 163 aaKnown RBP10.42□□□□□ -0.74
SDHA-216ENST00000514027 VN1R17PQ8TDU5 208 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 ZNF318Q5VUA4 2279 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 RAB29O14966 203 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 FCGR3BO75015 233 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
SDHA-216ENST00000514027 CLEC12BQ2HXU8 276 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 FFAR4Q5NUL3 377 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 CENPVQ7Z7K6 275 aaPredicted RBP10.42□□□□□ -0.74
SDHA-216ENST00000514027 MRGPRGQ86SM5 289 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 ZADH2Q8N4Q0 377 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 HSD17B10Q99714 261 aaKnown RBP10.42□□□□□ -0.74
SDHA-216ENST00000514027 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 NAT8Q9UHE5 227 aa10.42□□□□□ -0.74
SDHA-216ENST00000514027 IGKV1D-17A0A075B6S4 117 aa10.41□□□□□ -0.74
SDHA-216ENST00000514027 ZNF891A8MT65 544 aaPredicted RBP10.41□□□□□ -0.74
SDHA-216ENST00000514027 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
SDHA-216ENST00000514027 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
SDHA-216ENST00000514027 CGAP01215 116 aa10.41□□□□□ -0.74
SDHA-216ENST00000514027 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
SDHA-216ENST00000514027 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
SDHA-216ENST00000514027 MZT1Q08AG7 82 aa10.41□□□□□ -0.74
SDHA-216ENST00000514027 SEM1Q6ZVN7 128 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms