RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RPL30P62888 115 aaKnown RBP7.94□□□□□ -1.14
DDX41-216ENST00000513562 MRPS15P82914 257 aaKnown RBP7.94□□□□□ -1.14
DDX41-216ENST00000513562 RBMY1FQ15415 496 aaKnown RBP7.94□□□□□ -1.14
DDX41-216ENST00000513562 SSX9Q7RTT3 188 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 MAPKAPK5-AS1Q8N8E1 139 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 OR56B1Q8NGI3 324 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 OR4S2Q8NH73 311 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 ETV7Q9Y603 341 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
DDX41-216ENST00000513562 IGHV4-28A0A0C4DH34 117 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 OR2T8A6NH00 312 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 C15orf61A6NNL5 157 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 SLC17A2O00624 439 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 MYL12BO14950 172 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 MRPS14O60783 128 aaKnown RBP7.93□□□□□ -1.14
DDX41-216ENST00000513562 CIB2O75838 187 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 IGLV2-14P01704 120 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 HLA-GP17693 338 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 RASSF2P50749 326 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 RPL8P62917 257 aaKnown RBP7.93□□□□□ -1.14
DDX41-216ENST00000513562 ST3GAL4Q11206 333 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 SSX1Q16384 188 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 HSD17B12Q53GQ0 312 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 MS4A15Q8N5U1 240 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 VN1R17PQ8TDU5 208 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 MAFIPQ8WZ33 124 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 BSCL2Q96G97 398 aaPredicted RBP7.93□□□□□ -1.14
DDX41-216ENST00000513562 RNF2Q99496 336 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 GFI1Q99684 422 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 C20orf24Q9BUV8 137 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 THYN1Q9P016 225 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 SMPXQ9UHP9 88 aa7.93□□□□□ -1.14
DDX41-216ENST00000513562 RBMX2Q9Y388 322 aaKnown RBP7.93□□□□□ -1.14
DDX41-216ENST00000513562 IGHV3OR16-8A0A075B7F1 116 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 IGLC7A0M8Q6 106 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 C15orf62A8K5M9 175 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 ZNF207O43670 478 aaKnown RBP7.92□□□□□ -1.14
DDX41-216ENST00000513562 UCHL1P09936 223 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 CD36P16671 472 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 CRHBPP24387 322 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 TFPI2P48307 235 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 BRWD1-AS2P59051 145 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 OR2B8PP59922 312 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 ZFP1Q6P2D0 407 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 SPSB3Q6PJ21 355 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 Q6ZR54 194 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 Q6ZS49 121 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 ZNF555Q8NEP9 628 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 CENPOQ9BU64 300 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 PLGRKTQ9HBL7 147 aa7.92□□□□□ -1.14
DDX41-216ENST00000513562 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 CHEK1O14757 476 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 MIFP14174 115 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 EIF4EBP1Q13541 118 aaPredicted RBP7.91□□□□□ -1.14
DDX41-216ENST00000513562 RAB11BQ15907 218 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 CENPSQ8N2Z9 138 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 RAB3CQ96E17 227 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 ATP6V0BQ99437 205 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 HSD17B10Q99714 261 aaKnown RBP7.91□□□□□ -1.14
DDX41-216ENST00000513562 SRSF8Q9BRL6 282 aaKnown RBP7.91□□□□□ -1.14
DDX41-216ENST00000513562 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 RHPN1-AS1Q9BWJ2 59 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 BET1LQ9NYM9 111 aa7.91□□□□□ -1.14
DDX41-216ENST00000513562 IGKV1D-8A0A087WSZ0 117 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 ELOA3CA0A087WX78 387 aaPredicted RBP7.9□□□□□ -1.14
DDX41-216ENST00000513562 DEFB131BA0A096LNP1 70 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 IGHV7-4-1A0A0J9YVY3 117 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 ZNF705EA8MWA4 302 aaPredicted RBP7.9□□□□□ -1.14
DDX41-216ENST00000513562 F8W735 103 aaPredicted RBP7.9□□□□□ -1.14
DDX41-216ENST00000513562 J3QRK9 145 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 RAB27BO00194 218 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 MFNGO00587 321 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 DENRO43583 198 aaKnown RBP7.9□□□□□ -1.14
DDX41-216ENST00000513562 SLC22A5O76082 557 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 HRASP01112 189 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 HLA-DQB1P01920 261 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 CD74P04233 296 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.14
DDX41-216ENST00000513562 CLDN12P56749 244 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 PLA2G7Q13093 441 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 SOHLH1Q5JUK2 328 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 FAM90A2PQ658T7 463 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 NANOGP1Q8N7R0 232 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 GDPD1Q8N9F7 314 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 TCTEX1D2Q8WW35 142 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 FAM3DQ96BQ1 224 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 ZNF414Q96IQ9 312 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 NDUFAF3Q9BU61 184 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 SMPD3Q9NY59 655 aaPredicted RBP7.9□□□□□ -1.14
DDX41-216ENST00000513562 OR2W1Q9Y3N9 320 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 X6R8D5 127 aa7.9□□□□□ -1.14
DDX41-216ENST00000513562 IGKV3-7A0A075B6H7 116 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 IGLV2-18A0A075B6J9 118 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 IGKV1D-13A0A0B4J2D9 117 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 TMEM272A0A1B0GTI8 110 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 C16orf90A8MZG2 172 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 CYB5BO43169 146 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 IGKV1-13P0DP09 117 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 GNB3P16520 340 aa7.89□□□□□ -1.15
DDX41-216ENST00000513562 C12orf74Q32Q52 190 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms