RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 SERPINE3A8MV23 424 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 VGLL3A8MV65 326 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 ODF3BA8MYP8 253 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 OOSP1A8MZH6 123 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 M0QZK8 103 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CCRL2O00421 344 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CHEK1O14757 476 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 GEMIN2O14893 280 aaKnown RBP2.71□□□□□ -1.98
NUP54-212ENST00000513248 CHST1O43916 411 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 TSC22D2O75157 780 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CSN2P05814 226 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CDK1P06493 297 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 FCGR3AP08637 254 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 GNAO1P09471 354 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 UBBP0CG47 229 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CD28P10747 220 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 MGMTP16455 207 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 SSTR5P35346 364 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 REG1BP48304 166 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 HSPA13P48723 471 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 RAB7AP51149 207 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 DYNLT3P51808 116 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 EFNB2P52799 333 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 RBM11P57052 281 aaKnown RBP2.71□□□□□ -1.98
NUP54-212ENST00000513248 RAB25P57735 213 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 BLCAPP62952 87 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 SLC35B1P78383 322 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 ADARB1P78563 741 aaKnown RBP2.71□□□□□ -1.98
NUP54-212ENST00000513248 BDH1Q02338 343 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 PLGLAQ15195 96 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 HLA-DRB5Q30154 266 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 C2orf76Q3KRA6 126 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 HSD17B12Q53GQ0 312 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 OGFRL1Q5TC84 451 aaPredicted RBP2.71□□□□□ -1.98
NUP54-212ENST00000513248 ELP2Q6IA86 826 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 RAB12Q6IQ22 244 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 TCF23Q7RTU1 214 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 SLC35E3Q7Z769 313 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 NDUFA11Q86Y39 141 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 C11orf42Q8N5U0 333 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 MS4A15Q8N5U1 240 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 DRAM1Q8N682 238 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 OR5AU1Q8NGC0 362 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 OR4P4Q8NGL7 312 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 OR56B4Q8NH76 319 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 PLPPR1Q8TBJ4 325 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 MRAPQ8TCY5 172 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 IL1F10Q8WWZ1 152 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 RGP1Q92546 391 aaPredicted RBP2.71□□□□□ -1.98
NUP54-212ENST00000513248 TMEM203Q969S6 136 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 MRPS24Q96EL2 167 aaKnown RBP2.71□□□□□ -1.98
NUP54-212ENST00000513248 COQ2Q96H96 371 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CXorf58Q96LI9 332 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 CNBD2Q96M20 576 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 DERL3Q96Q80 235 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 RASL11BQ9BPW5 248 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 FUNDC2Q9BWH2 189 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 Q9H521 79 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 ZNF702PQ9H963 129 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 OR2S2Q9NQN1 319 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 IL36GQ9NZH8 169 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 BLOC1S6Q9UL45 172 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 PSG11Q9UQ72 335 aa2.71□□□□□ -1.98
NUP54-212ENST00000513248 IGHV3OR16-12A0A075B7B8 117 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 PSMB11A5LHX3 300 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 PDCD5O14737 125 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 HSD17B6O14756 317 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 CASQ2O14958 399 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 ORC5O43913 435 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 PDCD6O75340 191 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 CA11O75493 328 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 ARL6IP5O75915 188 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 OR2F2O95006 317 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 LALBAP00709 142 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 IGKV1D-33P01593 117 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 IGKV1-33P01594 117 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 HBZP02008 142 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 MT-ND4P03905 459 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 GLAP06280 429 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 IGFBP3P17936 291 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 FUT3P21217 361 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 MYL9P24844 172 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 PSMA1P25786 263 aaKnown RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 HTR2CP28335 458 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 CD34P28906 385 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 TALDO1P37837 337 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 VHLP40337 213 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 AQP4P55087 323 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 TRAM1Q15629 374 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 RAB11BQ15907 218 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 SYT6Q5T7P8 510 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 RSBN1Q5VWQ0 802 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 LIPKQ5VXJ0 399 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 DMKNQ6E0U4 476 aaPredicted RBP2.7□□□□□ -1.98
NUP54-212ENST00000513248 OR10K2Q6IF99 312 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 STEAP1BQ6NZ63 245 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 IZUMO2Q6UXV1 221 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 TGIF2LXQ8IUE1 241 aa2.7□□□□□ -1.98
NUP54-212ENST00000513248 CDH26Q8IXH8 852 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms