RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 FOXA2Q9Y261 457 aaPredicted RBP9.94□□□□□ -0.82
PDPN-210ENST00000513143 HMX3A6NHT5 357 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 FAM25EA8MYX2 175 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 TCF21O43680 179 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 ACTL6BO94805 426 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 SIX6O95475 246 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 CA2P00918 260 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
PDPN-210ENST00000513143 H2BFSP57053 126 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 OR2B8PP59922 312 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 UBA52P62987 128 aaKnown RBP9.93□□□□□ -0.82
PDPN-210ENST00000513143 SSBP2P81877 361 aaPredicted RBP9.93□□□□□ -0.82
PDPN-210ENST00000513143 IAH1Q2TAA2 248 aaPredicted RBP9.93□□□□□ -0.82
PDPN-210ENST00000513143 ZNF562Q6V9R5 426 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 ZBTB8BQ8NAP8 495 aaPredicted RBP9.93□□□□□ -0.82
PDPN-210ENST00000513143 OR4D5Q8NGN0 318 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 C2orf50Q96LR7 162 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 QTRT1Q9BXR0 403 aaKnown RBP9.93□□□□□ -0.82
PDPN-210ENST00000513143 FKBP11Q9NYL4 201 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 ZNF257Q9Y2Q1 563 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 CUBNO60494 3623 aa9.93□□□□□ -0.82
PDPN-210ENST00000513143 hCG_2014768A0A024R1R8 64 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 IGHV7-81A0A0B4J1V7 117 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 ST8SIA3O43173 380 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 RBMXL2O75526 392 aaKnown RBP9.92□□□□□ -0.82
PDPN-210ENST00000513143 TRAPPC2P0DI81 140 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 TRAPPC2BP0DI82 140 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 COMPP49747 757 aaPredicted RBP9.92□□□□□ -0.82
PDPN-210ENST00000513143 RPL15P61313 204 aaKnown RBP9.92□□□□□ -0.82
PDPN-210ENST00000513143 BLCAPP62952 87 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 CX3CL1P78423 397 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 SRSF4Q08170 494 aaKnown RBP9.92□□□□□ -0.82
PDPN-210ENST00000513143 IL15RAQ13261 267 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 OR52E5Q8NH55 327 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 OR1S1Q8NH92 325 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 CHAC2Q8WUX2 184 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 NPFFR1Q9GZQ6 430 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 CACFD1Q9UGQ2 172 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 OR51B2Q9Y5P1 312 aa9.92□□□□□ -0.82
PDPN-210ENST00000513143 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
PDPN-210ENST00000513143 TEX50A0A1B0GTY4 177 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 FAM181BA6NEQ2 426 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
PDPN-210ENST00000513143 MYOD1P15172 320 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 BCAP31P51572 246 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 HSPE1P61604 102 aaKnown RBP9.91□□□□□ -0.82
PDPN-210ENST00000513143 GNB1P62873 340 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 CYCSP99999 105 aaKnown RBP9.91□□□□□ -0.82
PDPN-210ENST00000513143 ID3Q02535 119 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 FXYD3Q14802 87 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 TNXAQ16473 311 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 PDLIM3Q53GG5 364 aaPredicted RBP9.91□□□□□ -0.82
PDPN-210ENST00000513143 C10orf55Q5SWW7 151 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 Q6ZS46 218 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 HSPB9Q9BQS6 159 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 PDCD10Q9BUL8 212 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 NMES1Q9C002 83 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 ZNF436Q9C0F3 470 aaPredicted RBP9.91□□□□□ -0.82
PDPN-210ENST00000513143 COMMD5Q9GZQ3 224 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 GSKIPQ9P0R6 139 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
PDPN-210ENST00000513143 NF1P21359 2839 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 A0A1B0GW64 132 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 CGB1A6NKQ9 187 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 E7EUB6 86 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 TRIM77I1YAP6 450 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 CNIH1O95406 144 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 IFNA17P01571 189 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 IGHG2P01859 326 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 RPL27AP46776 148 aaKnown RBP9.9□□□□□ -0.82
PDPN-210ENST00000513143 SPCS3P61009 180 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 NDPQ00604 133 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 TNFRSF9Q07011 255 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 CXorf66Q5JRM2 361 aaPredicted RBP9.9□□□□□ -0.82
PDPN-210ENST00000513143 Q8N2B8 174 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 SRSF12Q8WXF0 261 aaKnown RBP9.9□□□□□ -0.82
PDPN-210ENST00000513143 ASB13Q8WXK3 278 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 ARPC1AQ92747 370 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 WDR89Q96FK6 387 aaPredicted RBP9.9□□□□□ -0.82
PDPN-210ENST00000513143 FYTTD1Q96QD9 318 aaKnown RBP9.9□□□□□ -0.82
PDPN-210ENST00000513143 PRSS22Q9GZN4 317 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
PDPN-210ENST00000513143 LINC01548A6NM66 108 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 KCNAB3O43448 404 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 OPN1MWP04001 364 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 GIPP09681 153 aaPredicted RBP9.89□□□□□ -0.83
PDPN-210ENST00000513143 OPN1MW2P0DN77 364 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 OPN1MW3P0DN78 364 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 EGR2P11161 476 aaPredicted RBP9.89□□□□□ -0.83
PDPN-210ENST00000513143 NKX2-1P43699 371 aaPredicted RBP9.89□□□□□ -0.83
PDPN-210ENST00000513143 CRIP2P52943 208 aaPredicted RBP9.89□□□□□ -0.83
PDPN-210ENST00000513143 PRCDQ00LT1 54 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 C9orf152Q5JTZ5 239 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 ZNF702PQ9H963 129 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 FBXO7Q9Y3I1 522 aa9.89□□□□□ -0.83
PDPN-210ENST00000513143 MSGN1A6NI15 193 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms