RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 SOD3P08294 240 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 RAB13P51153 203 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 HSPE1P61604 102 aaKnown RBP10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 ARL16Q0P5N6 197 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 TMEM177Q53S58 311 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 AKR1C8PQ5T2L2 129 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR4A47Q6IF82 309 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 TMEM182Q6ZP80 229 aaPredicted RBP10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 LY6G5BQ8NDX9 201 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR4A5Q8NH83 315 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 ST6GALNAC6Q969X2 333 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR4C12Q96R67 309 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 BET1LQ9NYM9 111 aa10.68□□□□□ -0.7
DEPDC1B-206ENST00000512452 UPK2O00526 184 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 HBE1P02100 147 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 CD5P06127 495 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 MC5RP33032 325 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 VDAC2P45880 294 aaPredicted RBP10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 DVL1P1P54792 670 aaPredicted RBP10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 PRRX1P54821 245 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 RAB2AP61019 212 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 TUSC1Q2TAM9 212 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 WDR25Q64LD2 544 aaPredicted RBP10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 ABHD12Q8N2K0 398 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 C11orf42Q8N5U0 333 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 BEND2Q8NDZ0 799 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 VSTM2AQ8TAG5 236 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 TAF15Q92804 592 aaKnown RBP eCLIP10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 UQCC1Q9NVA1 299 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 TCF19Q9Y242 345 aa10.67□□□□□ -0.7
DEPDC1B-206ENST00000512452 TRAV1-1A0A0B4J248 108 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 A6NNC1 897 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 LYNX1G3V0Z9 82 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 H0YJW9 148 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 LIPFP07098 398 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 LYNX1P0DP58 116 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 M6PRP20645 277 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 SNCAP37840 140 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 ERVFRD-1P60508 538 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 ZNF616Q08AN1 781 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 PEA15Q15121 130 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 C10orf91Q5T1B1 145 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 SSX9Q7RTT3 188 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 THNSL2Q86YJ6 484 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR4C13Q8NGP0 309 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 FAM213BQ8TBF2 198 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 ZDHHC16Q969W1 377 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 NABP2Q9BQ15 211 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 MRPL20Q9BYC9 149 aaKnown RBP10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 PATZ1Q9HBE1 687 aaKnown RBP10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 CARHSP1Q9Y2V2 147 aaKnown RBP10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 AMMECR1Q9Y4X0 333 aaPredicted RBP10.66□□□□□ -0.7
DEPDC1B-206ENST00000512452 TLN2Q9Y4G6 2542 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 PPIAL4CA0A0B4J2A2 164 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 C15orf62A8K5M9 175 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 RNASEK-C17orf49H0YIS7 233 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 M0R1W7 72 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 KBTBD11O94819 623 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 MBP02144 154 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 PPIAL4GP0DN37 164 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR2B8PP59922 312 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 RAB11AP62491 216 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 TGIF2LXQ8IUE1 241 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 OR5B3Q8NH48 314 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 LHX4Q969G2 390 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 SEC11CQ9BY50 192 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 TREM1Q9NP99 234 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 ENY2Q9NPA8 101 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 HEYLQ9NQ87 328 aaPredicted RBP10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 WASHC3Q9Y3C0 194 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 VPS13CQ709C8 3753 aa10.65□□□□□ -0.7
DEPDC1B-206ENST00000512452 IGHV2-26A0A0B4J1V2 119 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 FNDC10F2Z333 226 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 INS-IGF2F8WCM5 200 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 MPDU1O75352 247 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 IGLV1-47P01700 117 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 H2AFB1P0C5Y9 115 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 MDKP21741 143 aaPredicted RBP10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 USF1P22415 310 aaPredicted RBP10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 HOXA1P49639 335 aaPredicted RBP10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 DLK1P80370 383 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 RUNX1Q01196 453 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 DEFB113Q30KQ7 82 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 AVPI1Q5T686 147 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 OR8G2PQ6IF36 304 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 VKORC1L1Q8N0U8 176 aa10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 FLYWCH2Q96CP2 140 aaKnown RBP10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 RBMXL1Q96E39 390 aaKnown RBP10.64□□□□□ -0.71
DEPDC1B-206ENST00000512452 TRAV3A0A0B4J244 114 aa10.63□□□□□ -0.71
DEPDC1B-206ENST00000512452 UBE2L5PA0A1B0GUS4 154 aa10.63□□□□□ -0.71
DEPDC1B-206ENST00000512452 C17orf112F2Z3M2 114 aa10.63□□□□□ -0.71
DEPDC1B-206ENST00000512452 IFNA10P01566 189 aa10.63□□□□□ -0.71
DEPDC1B-206ENST00000512452 LGALS7P47929 136 aa10.63□□□□□ -0.71
DEPDC1B-206ENST00000512452 EFNA4P52798 201 aa10.63□□□□□ -0.71
DEPDC1B-206ENST00000512452 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms