RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 OR8U8P0C7N1 319 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 P0C879 139 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 SAA1P0DJI8 122 aaPredicted RBP6.54□□□□□ -1.36
HTT-209ENST00000512068 HTR2BP41595 481 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 SULT1A1P50225 295 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 DLX1P56177 255 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 RAB11AP62491 216 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 PRB3Q04118 309 aaPredicted RBP6.54□□□□□ -1.36
HTT-209ENST00000512068 TMEM267Q0VDI3 215 aaPredicted RBP6.54□□□□□ -1.36
HTT-209ENST00000512068 HES1Q14469 280 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 CLINT1Q14677 625 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 C21orf62-AS1Q17RA5 79 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 DEFB113Q30KQ7 82 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 ALKAL2Q6UX46 152 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 ZNF429Q86V71 674 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 BAP18Q8IXM2 172 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 LRRC75A-AS1Q8N1F1 130 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 TMEM217Q8N7C4 229 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 STOML3Q8TAV4 291 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 SCGB1C1Q8TD33 95 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 ST6GALNAC6Q969X2 333 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 SIRPDQ9H106 197 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 UNKLQ9H9P5 680 aaKnown RBP6.54□□□□□ -1.36
HTT-209ENST00000512068 PLEKHA3Q9HB20 300 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 HEYLQ9NQ87 328 aaPredicted RBP6.54□□□□□ -1.36
HTT-209ENST00000512068 KIAA1456Q9P272 454 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 FOXA2Q9Y261 457 aaPredicted RBP6.54□□□□□ -1.36
HTT-209ENST00000512068 HILPDAQ9Y5L2 63 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 OR51B2Q9Y5P1 312 aa6.54□□□□□ -1.36
HTT-209ENST00000512068 A0A1W2PN81 502 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 IGSF23A1L1A6 192 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 ODF3BA8MYP8 253 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 B4DSR2 109 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 FAM157AC9JC47 383 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 UPK2O00526 184 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 CST7O76096 145 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 MSMBP08118 114 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 METTL15P1P0C7V9 234 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 GATA3P23771 443 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 CD1BP29016 333 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 BRS3P32247 399 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 CHRNA7P36544 502 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 DYNLT3P51808 116 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 UBE2E1P51965 193 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 HSPE1P61604 102 aaKnown RBP6.53□□□□□ -1.36
HTT-209ENST00000512068 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
HTT-209ENST00000512068 NHLH2Q02577 135 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 SPINK9Q5DT21 86 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 RPL7L1Q6DKI1 246 aaKnown RBP6.53□□□□□ -1.36
HTT-209ENST00000512068 OR8G2PQ6IF36 304 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 OR10P1Q8NGE3 313 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 OR5C1Q8NGR4 320 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 OR5B3Q8NH48 314 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 LRRC20Q8TCA0 184 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 PINX1Q96BK5 328 aaKnown RBP6.53□□□□□ -1.36
HTT-209ENST00000512068 ATP5SQ99766 215 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 RNF5Q99942 180 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 MMP26Q9NRE1 261 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 TCF19Q9Y242 345 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 ZNF257Q9Y2Q1 563 aa6.53□□□□□ -1.36
HTT-209ENST00000512068 HRNRQ86YZ3 2850 aaPredicted RBP6.53□□□□□ -1.36
HTT-209ENST00000512068 DOPEY2Q9Y3R5 2298 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 RNASEK-C17orf49H0YIS7 233 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 TIMM23O14925 209 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 SLC25A17O43808 307 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 IFNA4P05014 189 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 SNCAP37840 140 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 ERHP84090 104 aaKnown RBP6.52□□□□□ -1.37
HTT-209ENST00000512068 SLC38A11Q08AI6 406 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 SSX2Q16385 188 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 Q5PR19 223 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 CLEC9AQ6UXN8 241 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 MMD2Q8IY49 270 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 PUSL1Q8N0Z8 303 aaKnown RBP6.52□□□□□ -1.37
HTT-209ENST00000512068 LINC01356Q8N9X3 169 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 TEX45Q8NA69 505 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 UBAC2Q8NBM4 344 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 OR1L8Q8NGR8 309 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 TMEM167AQ8TBQ9 72 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 MALSU1Q96EH3 234 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 SLC25A32Q9H2D1 315 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 C11orf1Q9H5F2 150 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 TMEM14BQ9NUH8 114 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 AUP1Q9Y679 476 aa6.52□□□□□ -1.37
HTT-209ENST00000512068 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
HTT-209ENST00000512068 KMT2BQ9UMN6 2715 aaPredicted RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 TET2Q6N021 2002 aaPredicted RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 TRAV3A0A0B4J244 114 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 TRAV40A0A0B4J280 105 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 A0A1W2PPI3 338 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 LY6LH3BQJ8 138 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 NPFFO15130 113 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 MOSP00540 346 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 CFDP00746 253 aaPredicted RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 IGKV1D-33P01593 117 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 IGKV1-33P01594 117 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms