RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 TNS3Q68CZ2 1445 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 SETD1AO15047 1707 aaKnown RBP2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 NALCNQ8IZF0 1738 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 TET2Q6N021 2002 aaPredicted RBP2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 PIKFYVEQ9Y2I7 2098 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 ITGB4P16144 1822 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 IGLV3-16A0A075B6K0 115 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 A0A1B0GVG6 124 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 FABP5P3A8MUU1 101 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 C9JQL5 133 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 J3QR89 54 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 S100A2P29034 98 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 RPS10P46783 165 aaKnown RBP2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 ZNF83P51522 516 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 RSPO1Q2MKA7 263 aaPredicted RBP2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 DNLZQ5SXM8 178 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 GLT8D1Q68CQ7 371 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 RASL11AQ6T310 242 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 HRCT1Q6UXD1 115 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 Q6ZS49 121 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 DEFB128Q7Z7B8 93 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 PDZD9Q8IXQ8 264 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 ZNF645Q8N7E2 425 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 GNPNAT1Q96EK6 184 aaPredicted RBP2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 C18orf15Q96N68 181 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 AP1S3Q96PC3 154 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 OR2A5Q96R48 311 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 CCL13Q99616 98 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 OR2J1Q9GZK6 312 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 TMEM38BQ9NVV0 291 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 MRPL16Q9NX20 251 aaKnown RBP2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 FBXL12Q9NXK8 326 aa2.59□□□□□ -1.99
CALCOCO2-220ENST00000511816 NACAE9PAV3 2078 aa2.59□□□□□ -2
CALCOCO2-220ENST00000511816 ATRNO75882 1429 aa2.59□□□□□ -2
CALCOCO2-220ENST00000511816 ERBINQ96RT1 1412 aa2.59□□□□□ -2
CALCOCO2-220ENST00000511816 IGLV11-55A0A075B6I3 123 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TRAV9-1A0A075B6T8 112 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 LOC102724200A0A096LPH7 203 aaPredicted RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 IGHV3-74A0A0B4J1X5 117 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TRAV5A0A0B4J249 113 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 IGHV3-64DA0A0J9YX35 117 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 A0A0J9YY10 115 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TMEM269A0A1B0GVZ9 245 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 A0A1B0GX78 115 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TMEM72A0PK05 275 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 CD5LO43866 347 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 OR7C2O60412 319 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 DPM2O94777 84 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 OPN1SWP03999 348 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 SCTP09683 121 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 SMIM10L2AP0DMW4 78 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 SMIM10L2BP0DMW5 78 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 BCL2P10415 239 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 KDELR1P24390 212 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 S100A11P31949 105 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 CCR2P41597 374 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 CA7P43166 264 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 UBE2AP49459 152 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 FKBP1AP62942 108 aaKnown RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 PPP3R1P63098 170 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 LOXL1Q08397 574 aaPredicted RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TMEM183BQ1AE95 376 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 MRPL2Q5T653 305 aaKnown RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 FKBP1CQ5VVH2 108 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 EBLN2Q6P2I7 272 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 Q6Q795 121 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 MARCH3Q86UD3 253 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TMEM183AQ8IXX5 376 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 C1orf174Q8IYL3 243 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 SLC22A24Q8N4F4 322 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 ZNF709Q8N972 641 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 MRPL30Q8TCC3 161 aaKnown RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 RTN4IP1Q8WWV3 396 aaPredicted RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 ZNF414Q96IQ9 312 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 OR8D2Q9GZM6 311 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 IMUPQ9GZP8 106 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 WDR61Q9GZS3 305 aaKnown RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TAAR3PQ9P1P4 343 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 TAC3Q9UHF0 121 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 NAT8BQ9UHF3 227 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 AK3Q9UIJ7 227 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 AMMECR1Q9Y4X0 333 aaPredicted RBP2.58□□□□□ -2
CALCOCO2-220ENST00000511816 SIGLEC1Q9BZZ2 1709 aa2.58□□□□□ -2
CALCOCO2-220ENST00000511816 THSD7AQ9UPZ6 1657 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 CACNA1SQ13698 1873 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 TRBV20OR9-2A0A075B6H5 130 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 A0A1B0GW64 132 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 TRDV1A0A1B0GX56 115 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 A0A1W2PNU3 283 aaPredicted RBP2.57□□□□□ -2
CALCOCO2-220ENST00000511816 DPRXA6NFQ7 191 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 LST1O00453 97 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 COX7A2LO14548 114 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 OVOL1O14753 267 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 IGLV2-8P01709 118 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 UCHL1P09936 223 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 NTF3P20783 257 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 OPRK1P41145 380 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 LINC00313P59037 77 aa2.57□□□□□ -2
CALCOCO2-220ENST00000511816 RPS25P62851 125 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms