RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DEFA4P12838 97 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 MAS1LP35410 378 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 RBMY1FQ15415 496 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 LAMTOR1Q6IAA8 161 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 AHSA2Q719I0 299 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 MS4A15Q8N5U1 240 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 ZNF645Q8N7E2 425 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 OR4A5Q8NH83 315 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 CHRDL1Q9BU40 450 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 PLA2G2EQ9NZK7 142 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 PSORS1C1Q9UIG5 152 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 ELF5Q9UKW6 265 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 RBMX2Q9Y388 322 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 TMEM272A0A1B0GTI8 110 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 OR2T8A6NH00 312 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 MFNGO00587 321 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 DHFRP00374 187 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 GNB3P16520 340 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 CRHBPP24387 322 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 PTBP1P26599 531 aaKnown RBP eCLIP13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 RAB11BQ15907 218 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 C2orf76Q3KRA6 126 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 Q6ZTC4 211 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 FAM3DQ96BQ1 224 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 RNF2Q99496 336 aa13.81□□□□□ -0.2
HMGCS1-206ENST00000511774 APOBP04114 4563 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 C11orf94C9JXX5 98 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 F8W735 103 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 DENRO43583 198 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 HLA-DMBP28068 263 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 ADMP35318 185 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 TFPI2P48307 235 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 OR2B8PP59922 312 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 IRF3Q14653 427 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 TMEM91Q6ZNR0 172 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 RAB3CQ96E17 227 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 C20orf24Q9BUV8 137 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 PRELID3BQ9Y3B1 194 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 ETV7Q9Y603 341 aa13.8□□□□□ -0.2
HMGCS1-206ENST00000511774 A0A075B6Q4 140 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 TRAV3A0A0B4J244 114 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 HLA-GP17693 338 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 NFYAP23511 347 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 PQLC1Q8N2U9 271 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 VSTM2AQ8TAG5 236 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 CYGBQ8WWM9 190 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 SCRT1Q9BWW7 348 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 C6orf62Q9GZU0 229 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 HRH4Q9H3N8 390 aa13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 MRPS7Q9Y2R9 242 aaKnown RBP13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 LSM2Q9Y333 95 aaKnown RBP13.79□□□□□ -0.2
HMGCS1-206ENST00000511774 IGHV3-21A0A0B4J1V1 117 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 ATP5HO75947 161 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 GIG44P09565 113 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 MRPS15P82914 257 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 OR10W1Q8NGF6 305 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 TCTEX1D2Q8WW35 142 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 TMEM203Q969S6 136 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 FKBP14Q9NWM8 211 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 SMPXQ9UHP9 88 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
HMGCS1-206ENST00000511774 IGKV3-7A0A075B6H7 116 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 IGHV3-49A0A0A0MS15 119 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 GNAO1P09471 354 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 TMEM187Q14656 261 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 Q6ZS49 121 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 S100A14Q9HCY8 104 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 OR2W1Q9Y3N9 320 aa13.77□□□□□ -0.21
HMGCS1-206ENST00000511774 ELOA3CA0A087WX78 387 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 NDUFA4O00483 81 aa13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 CHEK1O14757 476 aa13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 HIST1H1DP16402 221 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 MFSD4AQ8N468 514 aa13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 OR10R2Q8NGX6 335 aa13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 VN1R17PQ8TDU5 208 aa13.76□□□□□ -0.21
HMGCS1-206ENST00000511774 TRAV10A0A0B4J240 114 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 K7EMT4 169 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 HES5Q5TA89 166 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 FAM90A2PQ658T7 463 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 PVRIGQ6DKI7 326 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 GBGT1Q8N5D6 347 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 BSCL2Q96G97 398 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 RHPN1-AS1Q9BWJ2 59 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 TAS2R8Q9NYW2 309 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
HMGCS1-206ENST00000511774 CD36P16671 472 aa13.74□□□□□ -0.21
HMGCS1-206ENST00000511774 RPS25P62851 125 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-206ENST00000511774 LIPKQ5VXJ0 399 aa13.74□□□□□ -0.21
HMGCS1-206ENST00000511774 BPIFB6Q8NFQ5 453 aa13.74□□□□□ -0.21
HMGCS1-206ENST00000511774 HSD17B10Q99714 261 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms