RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 LGALS9O00182 355 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 UPK2O00526 184 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 CD7P09564 240 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 FOLR2P14207 255 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 GNRHRP30968 328 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 RFX2P48378 723 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 CATR1Q13166 79 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 UBE2NLQ5JXB2 153 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 LINC00322Q6ZN03 302 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-213ENST00000511732 GPHB5Q86YW7 130 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 OR51H1Q8NH63 302 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 CACNG8Q8WXS5 425 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 S100A16Q96FQ6 103 aaKnown RBP11.55□□□□□ -0.56
COL1A1-213ENST00000511732 PLEKHA3Q9HB20 300 aa11.55□□□□□ -0.56
COL1A1-213ENST00000511732 IGLC7A0M8Q6 106 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 S1PR2O95136 353 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 LYL1P12980 280 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 RPA2P15927 270 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 NQO2P16083 231 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 ARL3P36405 182 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 TAS2R20P59543 309 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 CD81P60033 236 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 DHRS11Q6UWP2 260 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 CROCCP3Q8IVE0 287 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 SAMD12Q8N8I0 201 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 NEURL2Q9BR09 285 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 SPATA25Q9BR10 227 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 TUBA4BQ9H853 241 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 IFT46Q9NQC8 304 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 TMEM140Q9NV12 185 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 GAR1Q9NY12 217 aaKnown RBP11.54□□□□□ -0.56
COL1A1-213ENST00000511732 EHFQ9NZC4 300 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
COL1A1-213ENST00000511732 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 DHFRP00374 187 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 PMP2P02689 132 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 DEFA4P12838 97 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 NAT1P18440 290 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 CBLN1P23435 193 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 TMEM69Q5SWH9 247 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 AADACL3Q5VUY0 350 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 ZFAND6Q6FIF0 208 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 DYNLRB2Q8TF09 96 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 EEF1AKMT3Q96AZ1 226 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 WDR89Q96FK6 387 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-213ENST00000511732 AIFM2Q9BRQ8 373 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 ZNF2Q9BSG1 426 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-213ENST00000511732 PLEKHA2Q9HB19 425 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 RETNQ9HD89 108 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 ZC4H2Q9NQZ6 224 aa11.53□□□□□ -0.56
COL1A1-213ENST00000511732 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.56
COL1A1-213ENST00000511732 RLN1P04808 185 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.57
COL1A1-213ENST00000511732 HERV-K104P61576 105 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 LYSMD2Q8IV50 215 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 LAX1Q8IWV1 398 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 TSPAN14Q8NG11 270 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 FXYD6Q9H0Q3 95 aa11.52□□□□□ -0.57
COL1A1-213ENST00000511732 A0A087WXM4 84 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
COL1A1-213ENST00000511732 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
COL1A1-213ENST00000511732 PGLYRP1O75594 196 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-213ENST00000511732 CLEC3BP05452 202 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 EIF4EP06730 217 aaKnown RBP11.51□□□□□ -0.57
COL1A1-213ENST00000511732 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
COL1A1-213ENST00000511732 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 ZNF585BQ52M93 769 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 FCAMRQ8WWV6 532 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 SLC25A46Q96AG3 418 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 ISOC1Q96CN7 298 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 COMMD5Q9GZQ3 224 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 HIPK2Q9H2X6 1198 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 SLC2A8Q9NY64 477 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 TECRQ9NZ01 308 aaKnown RBP11.51□□□□□ -0.57
COL1A1-213ENST00000511732 COMMD9Q9P000 198 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 MLXQ9UH92 298 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 CEPT1Q9Y6K0 416 aa11.51□□□□□ -0.57
COL1A1-213ENST00000511732 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 A8MWP6 167 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 OR11H12B2RN74 326 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 TPPPO94811 219 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 F2RP25116 425 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 GPR183P32249 361 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 PRSS3P35030 304 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 NCS1P62166 190 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 WT1-ASQ06250 92 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 TM4SF20Q53R12 229 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 TMEM61Q8N0U2 210 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 UXS1Q8NBZ7 420 aa11.5□□□□□ -0.57
COL1A1-213ENST00000511732 OR5H2Q8NGV7 314 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms