RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 REG1AP05451 166 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 IGHV4-30-4P0DP06 118 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 HRH1P35367 487 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 OR2B8PP59922 312 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 LCN12Q6JVE5 192 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 LYSMD2Q8IV50 215 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 DMBX1Q8NFW5 382 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 OR6F1Q8NGZ6 308 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 DMRT1Q9Y5R6 373 aa17.46■□□□□ 0.39
SNF8-209ENST00000510558 HUWE1Q7Z6Z7 4374 aaKnown RBP17.46■□□□□ 0.39
SNF8-209ENST00000510558 STAB2Q8WWQ8 2551 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 PGLYRP1O75594 196 aaPredicted RBP17.45■□□□□ 0.38
SNF8-209ENST00000510558 HIST1H1BP16401 226 aaKnown RBP17.45■□□□□ 0.38
SNF8-209ENST00000510558 HLA-DMAP28067 261 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 KLK9Q2XQG4 91 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 SGPP2Q8IWX5 399 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 Q8N402 240 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 COMMD5Q9GZQ3 224 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 KLK9Q9UKQ9 250 aa17.45■□□□□ 0.38
SNF8-209ENST00000510558 HPGDSO60760 199 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 GGCTO75223 188 aaKnown RBP17.44■□□□□ 0.38
SNF8-209ENST00000510558 IGHV3-23P01764 117 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 HLA-AP01891 365 aaKnown RBP17.44■□□□□ 0.38
SNF8-209ENST00000510558 SMIM18P0DKX4 95 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 DEFA4P12838 97 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 RPA2P15927 270 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 F2RP25116 425 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 SNX29P2Q8IUI4 249 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 CMTM1Q8IZ96 169 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 CCDC140Q96MF4 163 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 RCHY1Q96PM5 261 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 SCPEP1Q9HB40 452 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 S4R3C0 116 aa17.44■□□□□ 0.38
SNF8-209ENST00000510558 IGLC7A0M8Q6 106 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 IZUMO1RA6ND01 250 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 GPR31O00270 319 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 FGF2P09038 288 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 ELK1P19419 428 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 RORCP51449 518 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 MECP2P51608 486 aaKnown RBP17.43■□□□□ 0.38
SNF8-209ENST00000510558 ERVK-16P61578 105 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 ADAMTSL5Q6ZMM2 481 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 OR2K2Q8NGT1 345 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 EEF1AKMT3Q96AZ1 226 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 THAP7Q9BT49 309 aaPredicted RBP17.43■□□□□ 0.38
SNF8-209ENST00000510558 NAA50Q9GZZ1 169 aaKnown RBP17.43■□□□□ 0.38
SNF8-209ENST00000510558 C19orf73Q9NVV2 129 aa17.43■□□□□ 0.38
SNF8-209ENST00000510558 IGLV11-55A0A075B6I3 123 aa17.42■□□□□ 0.38
SNF8-209ENST00000510558 MARCH11A6NNE9 402 aa17.42■□□□□ 0.38
SNF8-209ENST00000510558 A8MZ25 164 aa17.42■□□□□ 0.38
SNF8-209ENST00000510558 OR2C1O95371 312 aa17.42■□□□□ 0.38
SNF8-209ENST00000510558 CLEC19AQ6UXS0 136 aa17.42■□□□□ 0.38
SNF8-209ENST00000510558 DGCR14Q96DF8 476 aaKnown RBP17.42■□□□□ 0.38
SNF8-209ENST00000510558 SRSF8Q9BRL6 282 aaKnown RBP17.42■□□□□ 0.38
SNF8-209ENST00000510558 GABARAPO95166 117 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 RCVRNP35243 200 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 ARL3P36405 182 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 LPAR6P43657 344 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 TSPAN5P62079 268 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 GTSCR1Q86UQ5 136 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 FCAMRQ8WWV6 532 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 QTRT1Q9BXR0 403 aaKnown RBP17.41■□□□□ 0.38
SNF8-209ENST00000510558 ZMAT4Q9H898 229 aa17.41■□□□□ 0.38
SNF8-209ENST00000510558 MFSD2BA6NFX1 497 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 LGALS9O00182 355 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 CTF1Q16619 201 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 CD300EQ496F6 205 aaPredicted RBP17.4■□□□□ 0.38
SNF8-209ENST00000510558 ZNF585BQ52M93 769 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 PHLDA2Q53GA4 152 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 THOC7Q6I9Y2 204 aaKnown RBP17.4■□□□□ 0.38
SNF8-209ENST00000510558 MZT2AQ6P582 158 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 OR10W1Q8NGF6 305 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 DYNLRB2Q8TF09 96 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 CXorf58Q96LI9 332 aa17.4■□□□□ 0.38
SNF8-209ENST00000510558 C2orf70A6NJV1 201 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 FAM25AB3EWG3 89 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 FAM25CB3EWG5 89 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 FAM25GB3EWG6 89 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 KRASP01116 189 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 EDN2P20800 178 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 GPHB5Q86YW7 130 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 AP3S1Q92572 193 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 TM2D3Q9BRN9 247 aa17.39■□□□□ 0.37
SNF8-209ENST00000510558 TRBV7-1A0A0A6YYK4 115 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 TEX50A0A1B0GTY4 177 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 TRAPPC2P0DI81 140 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 TRAPPC2BP0DI82 140 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 G6PCP35575 357 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 GPR107Q5VW38 600 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 LPCAT3Q6P1A2 487 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 OR1L8Q8NGR8 309 aa17.38■□□□□ 0.37
SNF8-209ENST00000510558 KMT2CQ8NEZ4 4911 aaKnown RBP17.38■□□□□ 0.37
SNF8-209ENST00000510558 FOLR2P14207 255 aa17.37■□□□□ 0.37
SNF8-209ENST00000510558 ZNF182P17025 639 aaPredicted RBP17.37■□□□□ 0.37
SNF8-209ENST00000510558 S100GP29377 79 aa17.37■□□□□ 0.37
SNF8-209ENST00000510558 DEFB114Q30KQ6 69 aa17.37■□□□□ 0.37
SNF8-209ENST00000510558 RNASE12Q5GAN4 147 aaKnown RBP17.37■□□□□ 0.37
SNF8-209ENST00000510558 CADM3Q8N126 398 aa17.37■□□□□ 0.37
SNF8-209ENST00000510558 GDPD1Q8N9F7 314 aa17.37■□□□□ 0.37
SNF8-209ENST00000510558 THYN1Q9P016 225 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms