RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 PITX3O75364 302 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 PGLYRP1O75594 196 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 RHBDL1O75783 438 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 GZMHP20718 246 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 UCNP55089 124 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 S100A10P60903 97 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 ERVK-16P61578 105 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 SRSF6Q13247 344 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 ATXN7L3Q14CW9 347 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 TSC22D1Q15714 1073 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 WDR82Q6UXN9 313 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 ZNF818PQ6ZRF7 136 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 C11orf53Q8IXP5 236 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 SELENOHQ8IZQ5 122 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 SLC35G3Q8N808 338 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 LFNGQ8NES3 379 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 RDH5Q92781 318 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 C11orf52Q96A22 123 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 GALMQ96C23 342 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 RAB40CQ96S21 281 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 TP53RKQ96S44 253 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 GINS3Q9BRX5 216 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 SMDT1Q9H4I9 107 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 FNDC4Q9H6D8 234 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 PLEKHF2Q9H8W4 249 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 PARP11Q9NR21 331 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 TAS2R3Q9NYW6 316 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 TRAPPC2LQ9UL33 140 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 FAM215AQ9Y5M1 114 aa5.4□□□□□ -1.54
TRAPPC11-206ENST00000509857 GVINP1Q7Z2Y8 2422 aa5.4□□□□□ -1.55
TRAPPC11-206ENST00000509857 CACNA1DQ01668 2161 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 SPEGQ15772 3267 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 ARID1AO14497 2285 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 A0A1B0GVY2 172 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 BTBD17A6NE02 478 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 SERPINE2P07093 398 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 MPV17P39210 176 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 OR3A1P47881 315 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 TMEM33P57088 247 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 KLF3P57682 345 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 CATR1Q13166 79 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 SPATA46Q5T0L3 261 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 C10orf91Q5T1B1 145 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 DPPA3Q6W0C5 159 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 ZNF645Q8N7E2 425 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 LHFPL5Q8TAF8 219 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 PLPPR1Q8TBJ4 325 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 CD300LFQ8TDQ1 290 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 RASL10AQ92737 203 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 GNPNAT1Q96EK6 184 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 CXorf58Q96LI9 332 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 PARD6GQ9BYG4 376 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 ZC4H2Q9NQZ6 224 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 LYRM2Q9NU23 88 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 ZNF835Q9Y2P0 537 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 WSB1Q9Y6I7 421 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 CUL9Q8IWT3 2517 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 MUC3AQ02505 3323 aa5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 PTPRZ1P23471 2315 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-206ENST00000509857 MUC6Q6W4X9 2439 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 CEP250Q9BV73 2442 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 MYO15AQ9UKN7 3530 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 IGKV1D-13A0A0B4J2D9 117 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 A0A1B0GW64 132 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 K7ENP7 123 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 SOX15O60248 233 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 NDUFS6O75380 124 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 MED6O75586 246 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 OR8U8P0C7N1 319 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 IGKV1-13P0DP09 117 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 RCC1P18754 421 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 KIR2DS2P43631 304 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 CAV2P51636 162 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 TDGF1P3P51864 188 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 RPL23AP62750 156 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 PJVKQ0ZLH3 352 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 KIAA0141Q14154 515 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 SP6Q3SY56 376 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 BEX5Q5H9J7 111 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 Q6ZR03 302 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 ABHD12Q8N2K0 398 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 OR11L1Q8NGX0 322 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 SUN5Q8TC36 379 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 TSNAXQ99598 290 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 SEC11CQ9BY50 192 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 OPN3Q9H1Y3 402 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 NGBQ9NPG2 151 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 CCL28Q9NRJ3 127 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 IL19Q9UHD0 177 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 JPT1Q9UK76 154 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 RCL1Q9Y2P8 373 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 LSM5Q9Y4Y9 91 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 SMAD5-AS1Q9Y6J3 95 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 ACACAQ13085 2346 aa5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-206ENST00000509857 IGLV4-3A0A075B6K6 122 aa5.37□□□□□ -1.55
TRAPPC11-206ENST00000509857 TMEM218A2RU14 115 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms