RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 AWAT1Q58HT5 328 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 LYZL2Q7Z4W2 148 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 STPG2Q8N412 459 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 UXS1Q8NBZ7 420 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 OR52B4Q8NGK2 314 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 NOL4LQ96MY1 436 aaPredicted RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 SPIN2AQ99865 258 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 SPIN2BQ9BPZ2 258 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 SEC22CQ9BRL7 303 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 MARVELD1Q9BSK0 173 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 OR51B2Q9Y5P1 312 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 CUBNO60494 3623 aa11.71□□□□□ -0.54
RNF4-213ENST00000509388 TRAV41A0A0B4J266 112 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 PSMB11A5LHX3 300 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 MSGN1A6NI15 193 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
RNF4-213ENST00000509388 HOXB5P09067 269 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 OR2B8PP59922 312 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 THOC7Q6I9Y2 204 aaKnown RBP11.7□□□□□ -0.54
RNF4-213ENST00000509388 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 LRTM2Q8N967 370 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 SGMS2Q8NHU3 365 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 GPR146Q96CH1 333 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 HINT2Q9BX68 163 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 TMED3Q9Y3Q3 217 aa11.7□□□□□ -0.54
RNF4-213ENST00000509388 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 FGF2P09038 288 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 SPNP16150 400 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 NDPQ00604 133 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 IZUMO4Q1ZYL8 232 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 C12orf45Q8N5I9 185 aaPredicted RBP11.69□□□□□ -0.54
RNF4-213ENST00000509388 LFNGQ8NES3 379 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 OR1L8Q8NGR8 309 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 MITD1Q8WV92 249 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 TMEM68Q96MH6 324 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
RNF4-213ENST00000509388 C2CD3Q4AC94 2353 aa11.69□□□□□ -0.54
RNF4-213ENST00000509388 TEX50A0A1B0GTY4 177 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 G3V318 75 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 IFNA17P01571 189 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 TRAPPC2P0DI81 140 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 TRAPPC2BP0DI82 140 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 SULT1A3P0DMM9 295 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 SULT1A4P0DMN0 295 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 PROK1P58294 105 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 AKIRIN2Q53H80 203 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 MRPL41Q8IXM3 137 aaKnown RBP11.68□□□□□ -0.54
RNF4-213ENST00000509388 QTRT1Q9BXR0 403 aaKnown RBP11.68□□□□□ -0.54
RNF4-213ENST00000509388 WNT10AQ9GZT5 417 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 CACNG5Q9UF02 275 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 ZNF580Q9UK33 172 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 FOXA2Q9Y261 457 aaPredicted RBP11.68□□□□□ -0.54
RNF4-213ENST00000509388 FBXO7Q9Y3I1 522 aa11.68□□□□□ -0.54
RNF4-213ENST00000509388 A0A0B4J293 547 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 A0A0G2JRQ6 117 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 A0A1B0GU03 582 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 A0A1W2PN81 502 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 SNRPGP15A8MWD9 76 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 P0C879 139 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 APELAP0DMC3 54 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 MYOD1P15172 320 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 CHRNA7P36544 502 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
RNF4-213ENST00000509388 SSBP2P81877 361 aaPredicted RBP11.67□□□□□ -0.54
RNF4-213ENST00000509388 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 ZNF329Q86UD4 541 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 ZNF429Q86V71 674 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 C3orf56Q8N813 242 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 OR5AU1Q8NGC0 362 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 OR4X2Q8NGF9 303 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 OR1S1Q8NH92 325 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 ZNF355PQ9NSJ1 428 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 ZNF257Q9Y2Q1 563 aa11.67□□□□□ -0.54
RNF4-213ENST00000509388 HMX3A6NHT5 357 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 ADAP1O75689 374 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
RNF4-213ENST00000509388 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
RNF4-213ENST00000509388 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 TEX38Q6PEX7 206 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 TMEM65Q6PI78 240 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 Q6ZRM9 215 aa11.66□□□□□ -0.54
RNF4-213ENST00000509388 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
RNF4-213ENST00000509388 COMMD1Q8N668 190 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms