RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 H0Y980 276 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 S1PR2O95136 353 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 IGLV1-51P01701 117 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 FGF2P09038 288 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 F2RP25116 425 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 PSMB6P28072 239 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 ZNF45Q02386 682 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 CTF1Q16619 201 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 TMEM140Q9NV12 185 aa14.28□□□□□ -0.12
UBE3D-207ENST00000509102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.27□□□□□ -0.13
UBE3D-207ENST00000509102 MARCH11A6NNE9 402 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 UPK2O00526 184 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 PGLYRP1O75594 196 aaPredicted RBP14.27□□□□□ -0.13
UBE3D-207ENST00000509102 TRBV12-3P01733 135 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 IFNA6P05013 189 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 CRYGCP07315 174 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.13
UBE3D-207ENST00000509102 LYSMD2Q8IV50 215 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 DGCR14Q96DF8 476 aaKnown RBP14.27□□□□□ -0.13
UBE3D-207ENST00000509102 SRSF8Q9BRL6 282 aaKnown RBP14.27□□□□□ -0.13
UBE3D-207ENST00000509102 NAA50Q9GZZ1 169 aaKnown RBP14.27□□□□□ -0.13
UBE3D-207ENST00000509102 THYN1Q9P016 225 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 COL7A1Q02388 2944 aa14.27□□□□□ -0.13
UBE3D-207ENST00000509102 RBMXL2O75526 392 aaKnown RBP14.26□□□□□ -0.13
UBE3D-207ENST00000509102 AREGP15514 252 aa14.26□□□□□ -0.13
UBE3D-207ENST00000509102 LCN12Q6JVE5 192 aa14.26□□□□□ -0.13
UBE3D-207ENST00000509102 HSD17B13Q7Z5P4 300 aaPredicted RBP14.26□□□□□ -0.13
UBE3D-207ENST00000509102 EEF1AKMT3Q96AZ1 226 aa14.26□□□□□ -0.13
UBE3D-207ENST00000509102 QTRT1Q9BXR0 403 aaKnown RBP14.26□□□□□ -0.13
UBE3D-207ENST00000509102 FXYD6Q9H0Q3 95 aa14.26□□□□□ -0.13
UBE3D-207ENST00000509102 SIGLEC8Q9NYZ4 499 aa14.26□□□□□ -0.13
UBE3D-207ENST00000509102 E7EUB6 86 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 BMPR1BO00238 502 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 GGCTO75223 188 aaKnown RBP14.25□□□□□ -0.13
UBE3D-207ENST00000509102 SNAPC5O75971 98 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 TPPPO94811 219 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 CTRB1P17538 263 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 LPAR6P43657 344 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 OR2B8PP59922 312 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 CTRB2Q6GPI1 263 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 HAPLN4Q86UW8 402 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 SLC38A6Q8IZM9 456 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 CXorf58Q96LI9 332 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 WWC2-AS2Q96NR7 200 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 EXTL2Q9UBQ6 330 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 U3KQK5 164 aa14.25□□□□□ -0.13
UBE3D-207ENST00000509102 RGS5O15539 181 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 KRASP01116 189 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 REG1AP05451 166 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 RPA2P15927 270 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 PHLDA2Q53GA4 152 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 RNASE10Q5GAN6 216 aaKnown RBP14.24□□□□□ -0.13
UBE3D-207ENST00000509102 SGPP2Q8IWX5 399 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 Q8N402 240 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 FCAMRQ8WWV6 532 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 TSC22D3Q99576 134 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 ASCL2Q99929 193 aa14.24□□□□□ -0.13
UBE3D-207ENST00000509102 TRBV7-1A0A0A6YYK4 115 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 NOL3O60936 208 aaKnown RBP14.23□□□□□ -0.13
UBE3D-207ENST00000509102 TRAPPC2P0DI81 140 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 TRAPPC2BP0DI82 140 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 MYOD1P15172 320 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 TBPP20226 339 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 RNASE12Q5GAN4 147 aaKnown RBP14.23□□□□□ -0.13
UBE3D-207ENST00000509102 GTSCR1Q86UQ5 136 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 OR1L8Q8NGR8 309 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 OR2K2Q8NGT1 345 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 FAM212BQ9NTI7 297 aaPredicted RBP14.23□□□□□ -0.13
UBE3D-207ENST00000509102 FKBP11Q9NYL4 201 aa14.23□□□□□ -0.13
UBE3D-207ENST00000509102 TRAV3A0A0B4J244 114 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 A0A1B0GW64 132 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 PPP5D1E7EU14 171 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 NDUFB8O95169 186 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 CSN3P07498 182 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 ARL3P36405 182 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 ALDH3B2P48448 385 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 UCP3P55916 312 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 FAM106AQ4KMX7 169 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 CLEC19AQ6UXS0 136 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 C19orf35Q6ZS72 473 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 CADM3Q8N126 398 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 DYNLRB2Q8TF09 96 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 RAB2BQ8WUD1 216 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 FANCD2OSQ96PS1 177 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 HINT2Q9BX68 163 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 PRNDQ9UKY0 176 aa14.22□□□□□ -0.13
UBE3D-207ENST00000509102 IGLV11-55A0A075B6I3 123 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 IGLC7A0M8Q6 106 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 M0QYG6 137 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 PGAM2P15259 253 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 G6PCP35575 357 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 IL34Q6ZMJ4 242 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 TBC1D26Q86UD7 250 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 CLVS1Q8IUQ0 354 aaPredicted RBP14.21□□□□□ -0.13
UBE3D-207ENST00000509102 ARRDC1Q8N5I2 433 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 LSM10Q969L4 123 aaKnown RBP14.21□□□□□ -0.13
UBE3D-207ENST00000509102 TMEM56Q96MV1 263 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 KLK11Q9UBX7 282 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 OR51B2Q9Y5P1 312 aa14.21□□□□□ -0.13
UBE3D-207ENST00000509102 CGB1A6NKQ9 187 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms