RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 DEFA4P12838 97 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 CD36P16671 472 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 GALP22466 123 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 MAS1LP35410 378 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 TALDO1P37837 337 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 PSMD7P51665 324 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 PRR20EP86478 221 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 PRR20CP86479 221 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 PRR20DP86480 221 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 PRR20BP86481 221 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 PRR20AP86496 221 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 SSX9Q7RTT3 188 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 C5orf66Q9H5L9 145 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 UFC1Q9Y3C8 167 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 V9GY05 133 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 RAB27BO00194 218 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 TSPAN4O14817 238 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 MRPS14O60783 128 aaKnown RBP11.81□□□□□ -0.52
CXCL1-202ENST00000509101 NFYAP23511 347 aaPredicted RBP11.81□□□□□ -0.52
CXCL1-202ENST00000509101 TRAM1Q15629 374 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 KLK9Q2XQG4 91 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 UBE2UQ5VVX9 321 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 Q6ZS49 121 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 YTHDF1Q9BYJ9 559 aaKnown RBP11.81□□□□□ -0.52
CXCL1-202ENST00000509101 FBXL17Q9UF56 701 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 KLK9Q9UKQ9 250 aa11.81□□□□□ -0.52
CXCL1-202ENST00000509101 ELF5Q9UKW6 265 aaPredicted RBP11.81□□□□□ -0.52
CXCL1-202ENST00000509101 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 IGLV2-14P01704 120 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 PSMA1P25786 263 aaKnown RBP11.8□□□□□ -0.52
CXCL1-202ENST00000509101 ELLP55199 621 aaPredicted RBP11.8□□□□□ -0.52
CXCL1-202ENST00000509101 NANOS2P60321 138 aaKnown RBP11.8□□□□□ -0.52
CXCL1-202ENST00000509101 PLET1Q6UQ28 207 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 OR5B3Q8NH48 314 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 TMEM190Q8WZ59 177 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 NDUFB11Q9NX14 153 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 SPATA2Q9UM82 520 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 OR2W1Q9Y3N9 320 aa11.8□□□□□ -0.52
CXCL1-202ENST00000509101 CGB1A6NKQ9 187 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 HLA-DQB1P01920 261 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 RPA2P15927 270 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 RANBP1P43487 201 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 RPL8P62917 257 aaKnown RBP11.79□□□□□ -0.52
CXCL1-202ENST00000509101 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 GPHA2Q96T91 129 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 HSD17B10Q99714 261 aaKnown RBP11.79□□□□□ -0.52
CXCL1-202ENST00000509101 ZNF436Q9C0F3 470 aaPredicted RBP11.79□□□□□ -0.52
CXCL1-202ENST00000509101 MAP6D1Q9H9H5 199 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 TAS2R8Q9NYW2 309 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 PKHD1P08F94 4074 aa11.79□□□□□ -0.52
CXCL1-202ENST00000509101 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 TGOLN2O43493 480 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 SLC22A5O76082 557 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 HLA-GP17693 338 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 PSMB9P28065 219 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 RBMS2Q15434 407 aaKnown RBP11.78□□□□□ -0.52
CXCL1-202ENST00000509101 LAMTOR1Q6IAA8 161 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 ZNF773Q6PK81 442 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 CD300LFQ8TDQ1 290 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 FAT2Q9NYQ8 4349 aa11.78□□□□□ -0.52
CXCL1-202ENST00000509101 TRDV1A0A1B0GX56 115 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 HRASP01112 189 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 DTYMKP23919 212 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 OR10A3P58181 314 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 EIF4EBP1Q13541 118 aaPredicted RBP11.77□□□□□ -0.53
CXCL1-202ENST00000509101 TIMM50Q3ZCQ8 353 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 APRG1Q8IVJ8 170 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 MFSD4AQ8N468 514 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 C11orf45Q8TAV5 145 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 HRASLSQ9HDD0 168 aa11.77□□□□□ -0.53
CXCL1-202ENST00000509101 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.53
CXCL1-202ENST00000509101 DNAH2Q9P225 4427 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 IGHV3OR16-8A0A075B7F1 116 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 IGLC7A0M8Q6 106 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 OR2T8A6NH00 312 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 IFNA4P05014 189 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 RAB6AP20340 208 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 OR2B8PP59922 312 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 ZNF124Q15973 351 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 C22orf42Q6IC83 251 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 RARRES2Q99969 163 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 C6orf62Q9GZU0 229 aaPredicted RBP11.76□□□□□ -0.53
CXCL1-202ENST00000509101 C11orf68Q9H3H3 251 aaKnown RBP11.76□□□□□ -0.53
CXCL1-202ENST00000509101 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
CXCL1-202ENST00000509101 METTL21EPA6NDL7 271 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 TNFSF12O43508 249 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
CXCL1-202ENST00000509101 CTSDP07339 412 aaPredicted RBP11.75□□□□□ -0.53
CXCL1-202ENST00000509101 CTXN2P0C2S0 81 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 PTBP1P26599 531 aaKnown RBP eCLIP11.75□□□□□ -0.53
CXCL1-202ENST00000509101 NEDD8Q15843 81 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 KCTD21Q4G0X4 260 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 NR2C2APQ86WQ0 139 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 404.2 ms