RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CACNA1DQ01668 2161 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 TMEM250H0YL14 139 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 M0R036 132 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 SIAH2O43255 324 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 FCN3O75636 299 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 FOLR2P14207 255 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 ATF4P18848 351 aaPredicted RBP7.53□□□□□ -1.2
HTT-205ENST00000509043 MAS1LP35410 378 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 SUB1P53999 127 aaKnown RBP eCLIP7.53□□□□□ -1.2
HTT-205ENST00000509043 ELLP55199 621 aaPredicted RBP7.53□□□□□ -1.2
HTT-205ENST00000509043 ERVFRD-1P60508 538 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 RPL8P62917 257 aaKnown RBP7.53□□□□□ -1.2
HTT-205ENST00000509043 ERHP84090 104 aaKnown RBP7.53□□□□□ -1.2
HTT-205ENST00000509043 ZNF726P1Q15940 193 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 HAGHQ16775 308 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 BSXQ3C1V8 233 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 UTF1Q5T230 341 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 C11orf71Q6IPW1 123 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 ACSM6Q6P461 480 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 LCN15Q6UWW0 184 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 ZNF841Q6ZN19 808 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 CACNG8Q8WXS5 425 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 RARRES2Q99969 163 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 C19orf24Q9BVV8 132 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 COMMD5Q9GZQ3 224 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 SIRT7Q9NRC8 400 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 GNG13Q9P2W3 67 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
HTT-205ENST00000509043 RFNGQ9Y644 331 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 USF3Q68DE3 2245 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 POLEQ07864 2286 aa7.53□□□□□ -1.2
HTT-205ENST00000509043 TLN1Q9Y490 2541 aaKnown RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 DSPP15924 2871 aaKnown RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 MAP1BP46821 2468 aaKnown RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 TRAV3A0A0B4J244 114 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 PPIAL4CA0A0B4J2A2 164 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 TEX50A0A1B0GTY4 177 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 A0A1B0GV50 99 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 MED19A0JLT2 244 aaPredicted RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 C7orf77A4D0Y5 90 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 RRHO14718 337 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 MT-ND4LP03901 98 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 IGKV1-16P04430 117 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 LIPFP07098 398 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 SAA1P0DJI8 122 aaPredicted RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 PPIAL4GP0DN37 164 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 OR13C7P0DN81 318 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 COL8A2P25067 703 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 GPX4P36969 197 aaPredicted RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 RPL29P47914 159 aaKnown RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 FLI1Q01543 452 aaPredicted RBP7.52□□□□□ -1.21
HTT-205ENST00000509043 HLA-DRB5Q30154 266 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 RNF212Q495C1 297 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 SPINK9Q5DT21 86 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 TEX45Q8NA69 505 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 LY6G5BQ8NDX9 201 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 NANPQ8TBE9 248 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 RXFP4Q8TDU9 374 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 TVP23CQ96ET8 276 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 CLEC7AQ9BXN2 247 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 VSIRQ9H7M9 311 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 CHODLQ9H9P2 273 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 NDUFA4L2Q9NRX3 87 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 ASPMQ8IZT6 3477 aa7.52□□□□□ -1.21
HTT-205ENST00000509043 IGHV2-26A0A0B4J1V2 119 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 A0A1W2PPV4 95 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 ZFP92A6NM28 416 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 H3BQ15 152 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 M0R1W7 72 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 NUPL2O15504 423 aaKnown RBP7.51□□□□□ -1.21
HTT-205ENST00000509043 MT-CO2P00403 227 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 F12P00748 615 aaPredicted RBP7.51□□□□□ -1.21
HTT-205ENST00000509043 CA2P00918 260 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 IGKV1D-33P01593 117 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 IGKV1-33P01594 117 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 IGLV1-47P01700 117 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 RPS16P62249 146 aaKnown RBP7.51□□□□□ -1.21
HTT-205ENST00000509043 MEF2BQ02080 365 aaPredicted RBP7.51□□□□□ -1.21
HTT-205ENST00000509043 SSX2Q16385 188 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 WDR25Q64LD2 544 aaPredicted RBP7.51□□□□□ -1.21
HTT-205ENST00000509043 FAM122CQ6P4D5 195 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 TMEM88Q6PEY1 159 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 C1orf122Q6ZSJ8 110 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 CBLN2Q8IUK8 224 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 PNKDQ8N490 385 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 C11orf42Q8N5U0 333 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 Q8N7P7 452 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 CYB561D1Q8N8Q1 229 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 RNASEH2CQ8TDP1 164 aaKnown RBP7.51□□□□□ -1.21
HTT-205ENST00000509043 RAB24Q969Q5 203 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 SLC35E1Q96K37 410 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms