RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF688P0C7X2 276 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 LINC00032P0C843 101 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 OR5H8P0DN80 308 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 PIPP12273 146 aaPredicted RBP2□□□□□ -2.09
TOPBP1-206ENST00000508524 CTLA4P16410 223 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 CTRB1P17538 263 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 OTX1P32242 354 aaPredicted RBP2□□□□□ -2.09
TOPBP1-206ENST00000508524 RPS11P62280 158 aaKnown RBP eCLIP2□□□□□ -2.09
TOPBP1-206ENST00000508524 LCN6P62502 163 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 RBX1P62877 108 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 RUNX1Q01196 453 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 DYNC1I2Q13409 638 aaKnown RBP2□□□□□ -2.09
TOPBP1-206ENST00000508524 IMPG1Q17R60 797 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 RNASE13Q5GAN3 156 aaKnown RBP2□□□□□ -2.09
TOPBP1-206ENST00000508524 C8orf74Q6P047 294 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 H2BFWTQ7Z2G1 175 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 SLC36A1Q7Z2H8 476 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 SPATA12Q7Z6I5 190 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 OR6Q1Q8NGQ2 317 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 OR1L6Q8NGR2 347 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 OR5J2Q8NH18 312 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 OR2AE1Q8NHA4 323 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 CASTOR1Q8WTX7 329 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 TSEN15Q8WW01 171 aaKnown RBP2□□□□□ -2.09
TOPBP1-206ENST00000508524 GALNT14Q96FL9 552 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 CCDC115Q96NT0 180 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 TRNT1Q96Q11 434 aaKnown RBP2□□□□□ -2.09
TOPBP1-206ENST00000508524 HSPB9Q9BQS6 159 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 C1orf50Q9BV19 199 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 TXNIPQ9H3M7 391 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 C8orf17Q9NRJ1 99 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 TMEM216Q9P0N5 145 aa2□□□□□ -2.09
TOPBP1-206ENST00000508524 IGHV2-26A0A0B4J1V2 119 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 A0A0B4J2E0 115 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 A0A1B0GX12 115 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 TMEM120BA0PK00 339 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 IGLL5B9A064 214 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 KPNA4O00629 521 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 CDIPTO14735 213 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 AKR7A2O43488 359 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 RNF13O43567 381 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 NOL3O60936 208 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 GLAP06280 429 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 DBIP07108 87 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 ASAH2BP0C7U1 165 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 COX5BP10606 129 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 TUBG1P23258 451 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 CDKN2CP42773 168 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 SERPINB8P50452 374 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 OR12D2P58182 307 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 COPZ1P61923 177 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 RPL31P62899 125 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 ACTG2P63267 376 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 RPL18Q07020 188 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 DIAPH2-AS1Q14236 149 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 PPP1R7Q15435 360 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 DEFB135Q30KP9 77 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 LGALS9BQ3B8N2 356 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 LIN52Q52LA3 116 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 ATAD3BQ5T9A4 648 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 C3orf62Q6ZUJ4 267 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 SLC35E3Q7Z769 313 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 LRRC34Q8IZ02 419 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 TMEM256Q8N2U0 113 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 COMMD1Q8N668 190 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 OR1M1Q8NGA1 313 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 OR56B2PQ8NGI1 322 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 OR4A15Q8NGL6 344 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 NDNFQ8TB73 568 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 RASD2Q96D21 266 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 MRPL57Q9BQC6 102 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 ERP44Q9BS26 406 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 DPY30Q9C005 99 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 IQCGQ9H095 443 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 TLNRD1Q9H1K6 362 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 TUBG2Q9NRH3 451 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 GUCA1BQ9UMX6 200 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 ANGPT4Q9Y264 503 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 FIS1Q9Y3D6 152 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 HSPE1-MOB4S4R3N1 261 aa1.99□□□□□ -2.09
TOPBP1-206ENST00000508524 DSCAML1Q8TD84 2053 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 OR2AT4A6NND4 320 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 G3V318 75 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 LY6LH3BQJ8 138 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 DYNC1I1O14576 645 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 DEFB4AO15263 64 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 CNIH1O95406 144 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 CPSF4O95639 269 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 TMEM50AO95807 157 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 RBP1P09455 135 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 ACSM4P0C7M7 580 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 PSKH1P11801 424 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 MSR1P21757 451 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 CEACAM3P40198 252 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 GABRA2P47869 451 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 HIST1H3AP68431 136 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 HPCAP84074 193 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 GK3PQ14409 553 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 OR1Q1Q15612 314 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms