RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 GNB1P62873 340 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 CX3CL1P78423 397 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 NDPQ00604 133 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 KIAA0141Q14154 515 aaPredicted RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 KIR2DS1Q14954 304 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 OR2B11Q5JQS5 317 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 TEX38Q6PEX7 206 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 PPP1R27Q86WC6 154 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 ZNF695Q8IW36 515 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 H1FOOQ8IZA3 346 aaPredicted RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 SAMD12Q8N8I0 201 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 WFDC9Q8NEX5 89 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 NPBQ8NG41 125 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 OR5T1Q8NG75 326 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 OR8H1Q8NGG4 311 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 GRPEL2Q8TAA5 225 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 FLYWCH2Q96CP2 140 aaKnown RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 MS4A10Q96PG2 267 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 SRSF8Q9BRL6 282 aaKnown RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 DCUN1D5Q9BTE7 237 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 FAM103A1Q9BTL3 118 aaKnown RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 FUNDC2Q9BWH2 189 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 ALX4Q9H161 411 aaPredicted RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 OR2D2Q9H210 308 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 OR51J1Q9H342 316 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 AUNIPQ9H7T9 357 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 GNB4Q9HAV0 340 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 DIABLOQ9NR28 239 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 SLC35D1Q9NTN3 355 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 ZFP57Q9NU63 452 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 COMMD3Q9UBI1 195 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 MGAT4AQ9UM21 535 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 MRPS7Q9Y2R9 242 aaKnown RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 WASHC3Q9Y3C0 194 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 COL7A1Q02388 2944 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 WI2-2373I1.2A0A1W2PRP0 233 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 OR5H14A6NHG9 310 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 TRIM64CA6NLI5 447 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 USP17L23D6RBM5 183 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ARPC1BO15143 372 aaKnown RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 TNFSF12O43508 249 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 SOX15O60248 233 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 HPGDSO60760 199 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 TPPPO94811 219 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 NDUFA3O95167 84 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 CNIH1O95406 144 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 CRYZL1O95825 349 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 CA2P00918 260 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 IGLV2-23P01705 113 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 IGHV3-11P01762 117 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 IGHG4P01861 327 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 HLA-DRB1P01911 266 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 HLA-DQB1P01920 261 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 APOA2P02652 100 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 PMP2P02689 132 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 IGF1P05019 195 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 SMIM18P0DKX4 95 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 VDAC1P21796 283 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 AADACP22760 399 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 FCGR2CP31995 323 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 MYCNOSP40205 109 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 CDX1P47902 265 aaPredicted RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 RAB9AP51151 201 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 LUMP51884 338 aaPredicted RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 RPL30P62888 115 aaKnown RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 FXYD3Q14802 87 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ECSCRQ19T08 205 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ZNF674Q2M3X9 581 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 DEFB121Q5J5C9 76 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 CXorf66Q5JRM2 361 aaPredicted RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 GPR107Q5VW38 600 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ZNF660Q6AZW8 331 aaPredicted RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 CNIH2Q6PI25 160 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 UNQ5815/PRO19632Q6UWF5 114 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ZNF562Q6V9R5 426 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 IDO2Q6ZQW0 420 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 VKORC1L1Q8N0U8 176 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 MINDY2Q8NBR6 621 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 LFNGQ8NES3 379 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 OR1N2Q8NGR9 330 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 SECTM1Q8WVN6 248 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 S100A16Q96FQ6 103 aaKnown RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 TSNAXQ99598 290 aaKnown RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 CABLES2Q9BTV7 478 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 HRH4Q9H3N8 390 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 VCX3AQ9NNX9 186 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ZNF355PQ9NSJ1 428 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ANXA10Q9UJ72 324 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 OR2W1Q9Y3N9 320 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 NUBP2Q9Y5Y2 271 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 ETV7Q9Y603 341 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
NUP54-206ENST00000508465 PRKDCP78527 4128 aaKnown RBP3.5□□□□□ -1.85
NUP54-206ENST00000508465 A0A1W2PN81 502 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 MSGN1A6NI15 193 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 SULT1C2O00338 296 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 XRCC3O43542 346 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 BUB3O43684 328 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 FCGR3BO75015 233 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 RBBP9O75884 186 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms