RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SRSF2Q01130 221 aaKnown RBP11.23□□□□□ -0.61
RNF4-208ENST00000507247 SMCO1Q147U7 214 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.616e-6■■■■□ 22
RNF4-208ENST00000507247 WDR89Q96FK6 387 aaPredicted RBP11.23□□□□□ -0.61
RNF4-208ENST00000507247 JMJD8Q96S16 334 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 TMEM14BQ9NUH8 114 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
RNF4-208ENST00000507247 A0A1B0GW64 132 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 C5orf51A6NDU8 294 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 CGB1A6NKQ9 187 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 LINC01548A6NM66 108 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 ST8SIA3O43173 380 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 OPN1MWP04001 364 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 H2BFSP57053 126 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 GNB1P62873 340 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 CX3CL1P78423 397 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 IAH1Q2TAA2 248 aaPredicted RBP11.22□□□□□ -0.61
RNF4-208ENST00000507247 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 C9orf152Q5JTZ5 239 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 THOC7Q6I9Y2 204 aaKnown RBP11.22□□□□□ -0.61
RNF4-208ENST00000507247 GSG1LQ6UXU4 331 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 ZBTB8BQ8NAP8 495 aaPredicted RBP11.22□□□□□ -0.61
RNF4-208ENST00000507247 SPIN2AQ99865 258 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 SPIN2BQ9BPZ2 258 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
RNF4-208ENST00000507247 COA4Q9NYJ1 87 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 PRNDQ9UKY0 176 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
RNF4-208ENST00000507247 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 RBMXL2O75526 392 aaKnown RBP11.21□□□□□ -0.61
RNF4-208ENST00000507247 FGF2P09038 288 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 MAS1LP35410 378 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
RNF4-208ENST00000507247 FXYD3Q14802 87 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 ZNF429Q86V71 674 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 OR4D5Q8NGN0 318 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 OR1S1Q8NH92 325 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 CHAC2Q8WUX2 184 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
RNF4-208ENST00000507247 C2orf50Q96LR7 162 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 MDFIQ99750 246 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 NPFFR1Q9GZQ6 430 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 ZNF702PQ9H963 129 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 FBXO7Q9Y3I1 522 aa11.21□□□□□ -0.61
RNF4-208ENST00000507247 CUBNO60494 3623 aa11.21□□□□□ -0.62
RNF4-208ENST00000507247 HMX3A6NHT5 357 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 IGHG2P01859 326 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 EGR2P11161 476 aaPredicted RBP11.2□□□□□ -0.62
RNF4-208ENST00000507247 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
RNF4-208ENST00000507247 IL15RAQ13261 267 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 CXorf66Q5JRM2 361 aaPredicted RBP11.2□□□□□ -0.62
RNF4-208ENST00000507247 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
RNF4-208ENST00000507247 COMMD5Q9GZQ3 224 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 GSKIPQ9P0R6 139 aa11.2□□□□□ -0.62
RNF4-208ENST00000507247 ATP6V0E1O15342 81 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 ACTL6BO94805 426 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 CNIH1O95406 144 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 BCAP31P51572 246 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 HSPE1P61604 102 aaKnown RBP11.19□□□□□ -0.62
RNF4-208ENST00000507247 SRSF4Q08170 494 aaKnown RBP11.19□□□□□ -0.62
RNF4-208ENST00000507247 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 Q6ZSV7 163 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 SLC35E3Q7Z769 313 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 OR5B3Q8NH48 314 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 OR52E5Q8NH55 327 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 GRPEL2Q8TAA5 225 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 PDCD10Q9BUL8 212 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 PARP11Q9NR21 331 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 FKBP11Q9NYL4 201 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 ZNF257Q9Y2Q1 563 aa11.19□□□□□ -0.62
RNF4-208ENST00000507247 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 IFNA17P01571 189 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 APELAP0DMC3 54 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 SPCS3P61009 180 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
RNF4-208ENST00000507247 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 ID3Q02535 119 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 PDLIM3Q53GG5 364 aaPredicted RBP11.18□□□□□ -0.62
RNF4-208ENST00000507247 Q8N2B8 174 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 ABHD5Q8WTS1 349 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 FYTTD1Q96QD9 318 aaKnown RBP11.18□□□□□ -0.62
RNF4-208ENST00000507247 HINT2Q9BX68 163 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 NMES1Q9C002 83 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 ZNF436Q9C0F3 470 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms