RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 FAM25CB3EWG5 89 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 FAM25GB3EWG6 89 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 J3QRK9 145 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 SLC22A5O76082 557 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 SCTP09683 121 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 MAS1LP35410 378 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 ARL3P36405 182 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 PPP5CP53041 499 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 SSBP2P81877 361 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF79Q15937 498 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 LINC00336Q6ZUF6 198 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 CENPSQ8N2Z9 138 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 UXS1Q8NBZ7 420 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 RNF183Q96D59 192 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 CXorf58Q96LI9 332 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 SOSTQ9BQB4 213 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 AIFM2Q9BRQ8 373 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 KCNK15Q9H427 330 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 SDHAF2Q9NX18 166 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 THYN1Q9P016 225 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 OR1A1Q9P1Q5 309 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 UFC1Q9Y3C8 167 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 TMEM272A0A1B0GTI8 110 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 FABP12A6NFH5 140 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 SRRM4A7MD48 611 aaKnown RBP7.39□□□□□ -1.23
NEDD9-210ENST00000505589 TMEM14DPA8MWL7 114 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 A8MWP6 167 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 CYB5BO43169 146 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 OR2J3O76001 311 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 APELAP0DMC3 54 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 DEFA4P12838 97 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 RAB6AP20340 208 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 QRFPP83859 136 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 CDK10Q15131 360 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 C2orf76Q3KRA6 126 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 TMEM61Q8N0U2 210 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 FAM89BQ8N5H3 189 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 OR56B1Q8NGI3 324 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 SPAG8Q99932 426 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-210ENST00000505589 CCDC32Q9BV29 185 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 SRRQ9GZT4 340 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 OR2D2Q9H210 308 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 C5orf66Q9H5L9 145 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 RABL2AQ9UBK7 228 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-210ENST00000505589 AK3Q9UIJ7 227 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 RABL2BQ9UNT1 228 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 MRPS7Q9Y2R9 242 aaKnown RBP7.39□□□□□ -1.23
NEDD9-210ENST00000505589 PRELID3BQ9Y3B1 194 aa7.39□□□□□ -1.23
NEDD9-210ENST00000505589 HECTD4Q9Y4D8 3996 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 NPIPB5A8MRT5 1133 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 SCAF4O95104 1147 aaKnown RBP7.38□□□□□ -1.23
NEDD9-210ENST00000505589 CD3GP09693 182 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 MED14OSP0DP75 135 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 PSMB6P28072 239 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 ADMP35318 185 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 LINC00205P59089 165 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 PLA2G7Q13093 441 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 UNC119Q13432 240 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 IL18Q14116 193 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 TMEM69Q5SWH9 247 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 OR10K2Q6IF99 312 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 GDPD1Q8N9F7 314 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 C11orf45Q8TAV5 145 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 C2CD4CQ8TF44 421 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 S100A16Q96FQ6 103 aaKnown RBP7.38□□□□□ -1.23
NEDD9-210ENST00000505589 GINS4Q9BRT9 223 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 HERC2O95714 4834 aa7.38□□□□□ -1.23
NEDD9-210ENST00000505589 TRBV6-7A0A0A0MS04 114 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 A0A0A6YYH2 397 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 OR4C46A6NHA9 309 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 A6NJ64 397 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 C11orf94C9JXX5 98 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 PPP5D1E7EU14 171 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 BET1O15155 118 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 FABP7O15540 132 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 XRCC3O43542 346 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 DEDDO75618 318 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 UPK1BO75841 260 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 SCGNO76038 276 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 CRYZL1O95825 349 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 PRH1P02810 166 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 DUTP33316 252 aaKnown RBP7.37□□□□□ -1.23
NEDD9-210ENST00000505589 DEFA5Q01523 94 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 RBMS2Q15434 407 aaKnown RBP7.37□□□□□ -1.23
NEDD9-210ENST00000505589 DEFB135Q30KP9 77 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 ZNF585BQ52M93 769 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 PYDC2Q56P42 97 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 CLEC19AQ6UXS0 136 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 FYTTD1Q96QD9 318 aaKnown RBP7.37□□□□□ -1.23
NEDD9-210ENST00000505589 SDHCQ99643 169 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-210ENST00000505589 NICN1Q9BSH3 213 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 LPAR5Q9H1C0 372 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 ATG5Q9H1Y0 275 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 ZNF430Q9H8G1 570 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms