RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 SRSF12Q8WXF0 261 aaKnown RBP7.72□□□□□ -1.17
NR1I3-220ENST00000505005 RITA1Q96K30 269 aa7.72□□□□□ -1.17
NR1I3-220ENST00000505005 RANGRFQ9HD47 186 aaPredicted RBP7.72□□□□□ -1.17
NR1I3-220ENST00000505005 SLC2A9Q9NRM0 540 aa7.72□□□□□ -1.17
NR1I3-220ENST00000505005 WSB1Q9Y6I7 421 aa7.72□□□□□ -1.17
NR1I3-220ENST00000505005 MSGN1A6NI15 193 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 MARCH11A6NNE9 402 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 SRRM4A7MD48 611 aaKnown RBP7.71□□□□□ -1.18
NR1I3-220ENST00000505005 NPIPB5A8MRT5 1133 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 H0Y980 276 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 CCL24O00175 119 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 FCN1O00602 326 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 TNFSF12O43508 249 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 TRGV3P03979 118 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 RLN1P04808 185 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 PIGPP57054 158 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.18
NR1I3-220ENST00000505005 ZNF616Q08AN1 781 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 OR4A47Q6IF82 309 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 H2BFWTQ7Z2G1 175 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 TBC1D26Q86UD7 250 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 SGPP2Q8IWX5 399 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 OR1L8Q8NGR8 309 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 OR4A16Q8NH70 328 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 ENKURQ8TC29 256 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 MYOZ3Q8TDC0 251 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 RRNAD1Q96FB5 475 aaKnown RBP7.71□□□□□ -1.18
NR1I3-220ENST00000505005 CYYR1Q96J86 154 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 ATP6V0BQ99437 205 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 PDCD10Q9BUL8 212 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 ZNF430Q9H8G1 570 aaPredicted RBP7.71□□□□□ -1.18
NR1I3-220ENST00000505005 GAR1Q9NY12 217 aaKnown RBP7.71□□□□□ -1.18
NR1I3-220ENST00000505005 LINC00527Q9UJ94 153 aa7.71□□□□□ -1.18
NR1I3-220ENST00000505005 TEX13DA0A0J9YY54 714 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-220ENST00000505005 C3orf85A0A1B0GTC6 90 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 FAM240BA0A1B0GVZ2 78 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 LINC01548A6NM66 108 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 M0QYG6 137 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 UPK2O00526 184 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 RAMP3O60896 148 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 HSPB1P04792 205 aaKnown RBP7.7□□□□□ -1.18
NR1I3-220ENST00000505005 RPLP1P05386 114 aaKnown RBP7.7□□□□□ -1.18
NR1I3-220ENST00000505005 DEFA4P12838 97 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 LPAR6P43657 344 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 TPPP2P59282 170 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 FBLN7Q53RD9 439 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 C19orf54Q5BKX5 351 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 TCTEX1D4Q5JR98 221 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 PLET1Q6UQ28 207 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 LCNL1Q6ZST4 164 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 NECAP1Q8NC96 275 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 C5orf30Q96GV9 206 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 CXorf58Q96LI9 332 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 MARVELD1Q9BSK0 173 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 ELOVL1Q9BW60 279 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 TINAGL1Q9GZM7 467 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-220ENST00000505005 MCUBQ9NWR8 336 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 COA4Q9NYJ1 87 aa7.7□□□□□ -1.18
NR1I3-220ENST00000505005 A0A1W2PRX2 142 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 ADARB2-AS1A8MUL3 147 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 LINC01619G3V211 115 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 G3V318 75 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 RBMXL2O75526 392 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 SCGB2A1O75556 95 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 TSPAN15O95858 294 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 CRYGCP07315 174 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 LGALS1P09382 135 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 ZNF735P0CB33 412 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 TRAPPC2P0DI81 140 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 TRAPPC2BP0DI82 140 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 SUB1P53999 127 aaKnown RBP eCLIP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 RAB25P57735 213 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 LINC00205P59089 165 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 UBE2MP61081 183 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 ERHP84090 104 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 ATP5G2Q06055 141 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 PHLDA2Q53GA4 152 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 OR2B11Q5JQS5 317 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 C9orf66Q5T8R8 295 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 IDO2Q6ZQW0 420 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 NRARPQ7Z6K4 114 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 NOXA1Q86UR1 476 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 OR11H1Q8NG94 326 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 OR1N2Q8NGR9 330 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 RNASE11Q8TAA1 199 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 CHAC2Q8WUX2 184 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 IL22RA2Q969J5 263 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 LSM10Q969L4 123 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 PPP1R14BQ96C90 147 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 P2RX4Q99571 388 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 QTRT1Q9BXR0 403 aaKnown RBP7.69□□□□□ -1.18
NR1I3-220ENST00000505005 FXYD6Q9H0Q3 95 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 TMEM140Q9NV12 185 aa7.69□□□□□ -1.18
NR1I3-220ENST00000505005 DUXBA0A1W2PPF3 345 aa7.68□□□□□ -1.18
NR1I3-220ENST00000505005 I3L521 148 aa7.68□□□□□ -1.18
NR1I3-220ENST00000505005 PRAF2O60831 178 aa7.68□□□□□ -1.18
NR1I3-220ENST00000505005 LY86O95711 162 aa7.68□□□□□ -1.18
NR1I3-220ENST00000505005 KRASP01116 189 aa7.68□□□□□ -1.18
NR1I3-220ENST00000505005 IL6RP08887 468 aaPredicted RBP7.68□□□□□ -1.18
NR1I3-220ENST00000505005 EGR2P11161 476 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms