RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 NPBQ8NG41 125 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 STOML3Q8TAV4 291 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 SRSF8Q9BRL6 282 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 ZNF471Q9BX82 626 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 MEGF9Q9H1U4 602 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 PLEKHA3Q9HB20 300 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 SIGLEC9Q9Y336 463 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 FAM96BQ9Y3D0 163 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 HELZ2Q9BYK8 2649 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 A0A1W2PRD5 423 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 A0A1W2PRF3 423 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 A0A1W2PRM7 423 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 FAM24AA6NFZ4 105 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 MSGN1A6NI15 193 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 RRHO14718 337 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 NBR2O15453 112 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 SLC25A17O43808 307 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 NXPH3O95157 252 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 IGKV1D-33P01593 117 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 IGKV1-33P01594 117 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 CRYGBP07316 175 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 FBP1P09467 338 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 IAPPP10997 89 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 COMPP49747 757 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 PAX9P55771 341 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 ERHP84090 104 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 HES1Q14469 280 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 PLGLAQ15195 96 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 PSG5Q15238 335 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 MMDQ15546 238 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 PRSS8Q16651 343 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 ATP6V1FQ16864 119 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 SPANXN5Q5MJ07 72 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 LDLRAD2Q5SZI1 272 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 TMEM14EPQ6UXP3 125 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 PPP1R27Q86WC6 154 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 OR10P1Q8NGE3 313 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 OR1S2Q8NGQ3 325 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 NANPQ8TBE9 248 aa6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 METTL1Q9UBP6 276 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-202ENST00000503338 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 TEX50A0A1B0GTY4 177 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 IGSF23A1L1A6 192 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM50AO95807 157 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 IFNA10P01566 189 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 OR8U8P0C7N1 319 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM11P17152 192 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 HTR2BP41595 481 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 SUB1P53999 127 aaKnown RBP eCLIP6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 BAP18Q8IXM2 172 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 Q8N6K4 173 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 UBAC2Q8NBM4 344 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 ATP5SQ99766 215 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 GGACTQ9BVM4 153 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 ZNF430Q9H8G1 570 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 NDUFA4L2Q9NRX3 87 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 FBXL17Q9UF56 701 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 UBQLN2Q9UHD9 624 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 PITPNC1Q9UKF7 332 aa6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 PAIP2BQ9ULR5 123 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-202ENST00000503338 LRBAP50851 2863 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 M0QZK8 103 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 IFNA5P01569 189 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 NPY1RP25929 384 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 SNCAP37840 140 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 RPL27AP46776 148 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 RAB14P61106 215 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 IFITM2Q01629 132 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 NHLH2Q02577 135 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 C5orf64Q2M2E5 130 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 LRRC75BQ2VPJ9 315 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 DMRTA1Q5VZB9 504 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 C16orf82Q7Z2V1 217 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 LILRB2Q8N423 598 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 ZNF680Q8NEM1 530 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 SLC24A4Q8NFF2 622 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 OR5C1Q8NGR4 320 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 LRRC20Q8TCA0 184 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 GNPNAT1Q96EK6 184 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 PARD6GQ9BYG4 376 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 FBXL15Q9H469 300 aa6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 ANKRD17O75179 2603 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-202ENST00000503338 NCBP2LA6PVI3 153 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 C15orf62A8K5M9 175 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 FNDC10F2Z333 226 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 H3BP45 60 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 CORTO00230 105 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 CYB5BO43169 146 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 FGF16O43320 207 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 KCNAB3O43448 404 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 SOX15O60248 233 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms