RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 CLEC7AQ9BXN2 247 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 IGLV3-1P01715 115 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 AMY1AP04745 511 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 GPR6P46095 362 aaPredicted RBP9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 Q6P435 159 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 FAM201AQ5SY85 155 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 RNF138Q8WVD3 245 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 IFI27L2Q9H2X8 130 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 SAA2-SAA4A0A096LPE2 208 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 TRAV1-1A0A0B4J248 108 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 C15orf61A6NNL5 157 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 M0QZK8 103 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 GGCTO75223 188 aaKnown RBP9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 SAA2P0DJI9 122 aaPredicted RBP9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 CRYBB3P26998 211 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 TMEM183AQ8IXX5 376 aa9.01□□□□□ -0.97
LIMCH1-205ENST00000503057 A8MWL6 223 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 BSPH1Q075Z2 132 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 GPR61Q9BZJ8 451 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 DMRT1Q9Y5R6 373 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 DUTP33316 252 aaKnown RBP9□□□□□ -0.97
LIMCH1-205ENST00000503057 TRBV23-1A0A0A0MS06 115 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 SLC31A2O15432 143 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 CCL20P78556 96 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 MUC22E2RYF6 1773 aaPredicted RBP9□□□□□ -0.97
LIMCH1-205ENST00000503057 C17orf100A8MU93 164 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 MFAP2P55001 183 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 OR51G1Q8NGK1 321 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 STARD4Q96DR4 205 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 NAGKQ9UJ70 344 aa9□□□□□ -0.97
LIMCH1-205ENST00000503057 IGHG3P01860 377 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 KIR2DL2P43627 348 aaPredicted RBP8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 PRNTQ86SH4 94 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 TRIOBPQ9H2D6 2365 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 LILRA1O75019 489 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 FOSL1P15407 271 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 IGFBP2P18065 325 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 MRPL37Q9BZE1 423 aaKnown RBP8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 HILPDAQ9Y5L2 63 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 MPDZO75970 2070 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 PGPA6NDG6 321 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 SRRM5B3KS81 715 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 FOXF2Q12947 444 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 TRAV30A0A087WSZ9 112 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 S100A4P26447 101 aaKnown RBP8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 FAM122AQ96E09 287 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 MAP1LC3CQ9BXW4 147 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 DENND4AQ7Z401 1863 aa8.99□□□□□ -0.97
LIMCH1-205ENST00000503057 LIPFP07098 398 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 NPIPB3Q92617 1050 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 TBX15Q96SF7 602 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 BRWD1Q9NSI6 2320 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 M0QZ24 198 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 UPK2O00526 184 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 PSPNO60542 156 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 TIMP3P35625 211 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 CENPWQ5EE01 88 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 BPIFA4PQ86YQ2 179 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 MUC15Q8N387 334 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 COLCA2A8K830 154 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 IGKV1-5P01602 117 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 OR9G9P0C7N8 305 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 HOXA5P20719 270 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 RPL23P62829 140 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 HERPUD1Q15011 391 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 RNASEH2CQ8TDP1 164 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 SNRNP40Q96DI7 357 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 ABHD17AQ96GS6 310 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 PLAUP00749 431 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 TFF1P04155 84 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 FAM106CPP0CH98 169 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 ATP5G3P48201 142 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 VN1R17PQ8TDU5 208 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 TMEM242Q9NWH2 141 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 TEX50A0A1B0GTY4 177 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 REG1AP05451 166 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 CD55P08174 381 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 ACAA1P09110 424 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 SMIM17P0DL12 118 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
LIMCH1-205ENST00000503057 DIRC3C9JPN6 131 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 EGR1P18146 543 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 RSPO1Q2MKA7 263 aaPredicted RBP8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 Q6ZN92 141 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 HSPB9Q9BQS6 159 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 IL36BQ9NZH7 164 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 WIPF3A6NGB9 483 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 RRHO14718 337 aa8.97□□□□□ -0.97
LIMCH1-205ENST00000503057 SLC35B1P78383 322 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms