RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 TM4SF20Q53R12 229 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 BTNL8Q6UX41 500 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 H1FOOQ8IZA3 346 aaPredicted RBP11.96□□□□□ -0.49
MUC1-220ENST00000498431 OR5H6Q8NGV6 325 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 RAB3CQ96E17 227 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 GINS4Q9BRT9 223 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 KIAA1109Q2LD37 5005 aa11.96□□□□□ -0.5
MUC1-220ENST00000498431 A0A075B6Q4 140 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 A8MWP6 167 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 DIRAS3O95661 229 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 RPL30P62888 115 aaKnown RBP11.95□□□□□ -0.5
MUC1-220ENST00000498431 FAM209BQ5JX69 171 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 SLC25A42Q86VD7 318 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 WFDC3Q8IUB2 231 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 DCUN1D5Q9BTE7 237 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 RHBDL2Q9NX52 303 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
MUC1-220ENST00000498431 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 MFNGO00587 321 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 CREBL2O60519 120 aaPredicted RBP11.94□□□□□ -0.5
MUC1-220ENST00000498431 SCGNO76038 276 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 AREGP15514 252 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 DEFB135Q30KP9 77 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 UNQ9165/PRO28630Q6UXU0 137 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
MUC1-220ENST00000498431 FYTTD1Q96QD9 318 aaKnown RBP11.94□□□□□ -0.5
MUC1-220ENST00000498431 ELF5Q9UKW6 265 aaPredicted RBP11.94□□□□□ -0.5
MUC1-220ENST00000498431 DNAH6Q9C0G6 4158 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 MFSD2BA6NFX1 497 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 SPRY2O43597 315 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 MYOD1P15172 320 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 RPL27AP46776 148 aaKnown RBP11.93□□□□□ -0.5
MUC1-220ENST00000498431 FAM106AQ4KMX7 169 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 OR10R2Q8NGX6 335 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
MUC1-220ENST00000498431 SLIRPQ9GZT3 109 aaKnown RBP11.93□□□□□ -0.5
MUC1-220ENST00000498431 RYR1P21817 5038 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 RAB27BO00194 218 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 KBTBD11O94819 623 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 REG1AP05451 166 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 ZNF735P0CB33 412 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
MUC1-220ENST00000498431 BMI1P35226 326 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 BRWD1-AS2P59051 145 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 ANKRD55Q3KP44 614 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 Q6ZWC4 215 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 PUSL1Q8N0Z8 303 aaKnown RBP11.92□□□□□ -0.5
MUC1-220ENST00000498431 ZNF645Q8N7E2 425 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 MCFD2Q8NI22 146 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
MUC1-220ENST00000498431 DIABLOQ9NR28 239 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 TP53TG1Q9Y2A0 90 aa11.92□□□□□ -0.5
MUC1-220ENST00000498431 A0A0A6YYH2 397 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 IGKV1D-13A0A0B4J2D9 117 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 IGHV3-35A0A0C4DH35 117 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 A6NJ64 397 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 HPGDSO60760 199 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 APOA1P02647 267 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 CRYGCP07315 174 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 IGKV1-13P0DP09 117 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 CTRB1P17538 263 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 NFYAP23511 347 aaPredicted RBP11.91□□□□□ -0.5
MUC1-220ENST00000498431 PSMB6P28072 239 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 ARL6IP1Q15041 203 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 TMEM167AQ8TBQ9 72 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 EEF1AKMT3Q96AZ1 226 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
MUC1-220ENST00000498431 KLK5Q9Y337 293 aaPredicted RBP11.91□□□□□ -0.5
MUC1-220ENST00000498431 RBMX2Q9Y388 322 aaKnown RBP11.91□□□□□ -0.5
MUC1-220ENST00000498431 TRAV25A0A0B4J276 109 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 CGB1A6NKQ9 187 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 FAM25AB3EWG3 89 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 FAM25CB3EWG5 89 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 FAM25GB3EWG6 89 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 RGS5O15539 181 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 S1PR2O95136 353 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 CLEC3BP05452 202 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 APOC4P55056 127 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 ARFRP1Q13795 201 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
MUC1-220ENST00000498431 Q6ZS49 121 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 C6orf62Q9GZU0 229 aaPredicted RBP11.9□□□□□ -0.5
MUC1-220ENST00000498431 NXF2Q9GZY0 626 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms