RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SULT1A4P0DMN0 295 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
CPNE1-227ENST00000498056 CX3CL1P78423 397 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 SSBP2P81877 361 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-227ENST00000498056 FXYD3Q14802 87 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 MRGPRG-AS1Q2M3A8 158 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 GGNBP1Q5YKI7 109 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 FOXRED2Q8IWF2 684 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 SRSF12Q8WXF0 261 aaKnown RBP10.73□□□□□ -0.69
CPNE1-227ENST00000498056 LSM10Q969L4 123 aaKnown RBP10.73□□□□□ -0.69
CPNE1-227ENST00000498056 GPR146Q96CH1 333 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 FYTTD1Q96QD9 318 aaKnown RBP10.73□□□□□ -0.69
CPNE1-227ENST00000498056 SPIN2AQ99865 258 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 SPIN2BQ9BPZ2 258 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 HINT2Q9BX68 163 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 COMMD5Q9GZQ3 224 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 OR51J1Q9H342 316 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 PRNDQ9UKY0 176 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 TMED3Q9Y3Q3 217 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 OR51B2Q9Y5P1 312 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 C7orf66A4D0T2 115 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 DBX1A6NMT0 343 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 MPTX1A8MV57 137 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 GOSR2O14653 212 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 IGHG2P01859 326 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 APELAP0DMC3 54 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 MAS1LP35410 378 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 COMPP49747 757 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-227ENST00000498056 SMCO1Q147U7 214 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 ZNF562Q6V9R5 426 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 OR4F5Q8NH21 305 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
CPNE1-227ENST00000498056 FOXA2Q9Y261 457 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-227ENST00000498056 FBXO7Q9Y3I1 522 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 NF1P21359 2839 aa10.72□□□□□ -0.69
CPNE1-227ENST00000498056 LINC01548A6NM66 108 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 AP4M1O00189 453 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 NDUFA7O95182 113 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 KRTAP24-1Q3LI83 254 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 SPINK9Q5DT21 86 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 Q8N2B8 174 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 NOL4LQ96MY1 436 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-227ENST00000498056 TMEM14BQ9NUH8 114 aa10.71□□□□□ -0.69
CPNE1-227ENST00000498056 C13orf42A0A1B0GVH6 325 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 C5orf51A6NDU8 294 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 ST8SIA3O43173 380 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 TSPAN9O75954 239 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 SCGB1D2O95969 90 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 IFNA17P01571 189 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 IL6RP08887 468 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-227ENST00000498056 FGF2P09038 288 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 HKR1P10072 659 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 MDKP21741 143 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-227ENST00000498056 HOXA1P49639 335 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-227ENST00000498056 IAH1Q2TAA2 248 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-227ENST00000498056 UNQ5815/PRO19632Q6UWF5 114 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 Q6ZRM9 215 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 OR5B3Q8NH48 314 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 FKBP11Q9NYL4 201 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 MGAT4CQ9UBM8 478 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 WSB1Q9Y6I7 421 aa10.7□□□□□ -0.7
CPNE1-227ENST00000498056 TRAV41A0A0B4J266 112 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 A0A1B0GU03 582 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 HMX3A6NHT5 357 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 G3V318 75 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 C2orf68Q2NKX9 166 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 GSG1LQ6UXU4 331 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 ZNF429Q86V71 674 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 CADM3Q8N126 398 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 STPG2Q8N412 459 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 KLHDC1Q8N7A1 406 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 OR5M8Q8NGP6 311 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 SGMS2Q8NHU3 365 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 C16orf95Q9H693 158 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 PLEKHA3Q9HB20 300 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-227ENST00000498056 SERTAD4Q9NUC0 356 aa10.69□□□□□ -0.7
CPNE1-227ENST00000498056 hCG_2014768A0A024R1R8 64 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 TEX50A0A1B0GTY4 177 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 A0A1B0GW64 132 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 A0A1W2PN81 502 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 PSMB11A5LHX3 300 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 E7EUB6 86 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 SIX6O95475 246 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 IGF1P05019 195 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 REG1AP05451 166 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 AREGP15514 252 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 CHRNA7P36544 502 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 PRCDQ00LT1 54 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 ZBTB8BQ8NAP8 495 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-227ENST00000498056 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms