RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SULT1A3P0DMM9 295 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 SULT1A4P0DMN0 295 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 UCHL3P15374 230 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 RPL12P30050 165 aaKnown RBP0.98□□□□□ -2.25
PSPC1-205ENST00000497722 CAV1Q03135 178 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 MED21Q13503 144 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 PIGXQ8TBF5 258 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 ANKRD7Q92527 254 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 SERPINI1Q99574 410 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 MED9Q9NWA0 146 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 PAQR5Q9NXK6 330 aaPredicted RBP0.98□□□□□ -2.25
PSPC1-205ENST00000497722 USE1Q9NZ43 259 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 SNURFQ9Y675 71 aa0.98□□□□□ -2.25
PSPC1-205ENST00000497722 RP1L1Q8IWN7 2480 aaPredicted RBP0.98□□□□□ -2.25
PSPC1-205ENST00000497722 FN1P02751 2386 aaKnown RBP0.98□□□□□ -2.25
PSPC1-205ENST00000497722 ABCC12Q96J65 1359 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 KIAA2026Q5HYC2 2103 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 SIPA1L1O43166 1804 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 M0QZ92 97 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 DEXIO95424 95 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 NSA2O95478 260 aaKnown RBP0.97□□□□□ -2.25
PSPC1-205ENST00000497722 HLA-DRAP01903 254 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 FAM228BP0C875 321 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 MYL12AP19105 171 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 NFYAP23511 347 aaPredicted RBP0.97□□□□□ -2.25
PSPC1-205ENST00000497722 HLA-DMBP28068 263 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 EVX1P49640 407 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 MAP3K7CLP57077 242 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 MGAT3Q09327 533 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 C1orf195Q5TG92 126 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 FAM151BQ6UXP7 276 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 TMEM161BQ8NDZ6 487 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 OR8B3Q8NGG8 313 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 ROPN1LQ96C74 230 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 NKIRAS1Q9NYS0 192 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 RSL24D1Q9UHA3 163 aaKnown RBP0.97□□□□□ -2.25
PSPC1-205ENST00000497722 LAMB2P55268 1798 aa0.97□□□□□ -2.25
PSPC1-205ENST00000497722 KIF15Q9NS87 1388 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 A0A1B0GV50 99 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 H0Y980 276 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 ITGB1BP1O14713 200 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 SLC16A4O15374 487 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 SRP19P09132 144 aaKnown RBP0.96□□□□□ -2.26
PSPC1-205ENST00000497722 METTL15P1P0C7V9 234 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 MAP2K4P45985 399 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 COQ5Q5HYK3 327 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 CLVS2Q5SYC1 327 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 C1orf194Q5T5A4 169 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 FAM27BQ5VT28 67 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 GLT8D1Q68CQ7 371 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 UNQ6190/PRO20217Q6UXQ8 127 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 AAED1Q7RTV5 226 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 WFDC11Q8NEX6 87 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 SGMS2Q8NHU3 365 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 IMP3Q9NV31 184 aaKnown RBP0.96□□□□□ -2.26
PSPC1-205ENST00000497722 C3orf18Q9UK00 162 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 COQ4Q9Y3A0 265 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 NAV1Q8NEY1 1877 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 PTPRBP23467 1997 aa0.96□□□□□ -2.26
PSPC1-205ENST00000497722 WDR90Q96KV7 1748 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 TRAV14DV4A0A0A6YYC5 116 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 TRBV10-2A0A0K0K1G8 114 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 TRAPPC13A5PLN9 417 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 OR51F1A6NGY5 319 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 LRRN3E7EW58 273 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 CETN3O15182 167 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 MRPS14O60783 128 aaKnown RBP0.95□□□□□ -2.26
PSPC1-205ENST00000497722 PMP2P02689 132 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 COX5BP10606 129 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 RPS12P25398 132 aaKnown RBP0.95□□□□□ -2.26
PSPC1-205ENST00000497722 PLCXD2Q0VAA5 305 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 MLLT11Q13015 90 aaPredicted RBP0.95□□□□□ -2.26
PSPC1-205ENST00000497722 GRK1Q15835 563 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 Q1T7F1 81 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 ACSM3Q53FZ2 586 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 TNFAIP8L3Q5GJ75 292 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 LRRN1Q6UXK5 716 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 OR1M1Q8NGA1 313 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 MCFD2Q8NI22 146 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 RETNLBQ9BQ08 111 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 GINS4Q9BRT9 223 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 FUT9Q9Y231 359 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 LSM5Q9Y4Y9 91 aaKnown RBP0.95□□□□□ -2.26
PSPC1-205ENST00000497722 REREQ9P2R6 1566 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 ABCC11Q96J66 1382 aa0.95□□□□□ -2.26
PSPC1-205ENST00000497722 IRGMA1A4Y4 181 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 IGHV3-7P01780 117 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 TNNC2P02585 160 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 MAGEA2P43356 314 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 AP2S1P53680 142 aaPredicted RBP0.94□□□□□ -2.26
PSPC1-205ENST00000497722 RPL18Q07020 188 aaKnown RBP0.94□□□□□ -2.26
PSPC1-205ENST00000497722 HIST2H3PS2Q5TEC6 136 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 GID4Q8IVV7 300 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 C10orf67Q8IYJ2 551 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 DYNAPQ8N1N2 210 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 RAB8BQ92930 207 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 CNBD2Q96M20 576 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 MRPS26Q9BYN8 205 aaKnown RBP0.94□□□□□ -2.26
PSPC1-205ENST00000497722 OR5AC2Q9NZP5 309 aa0.94□□□□□ -2.26
PSPC1-205ENST00000497722 PCDH15Q96QU1 1955 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms