RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 IL15RAQ13261 267 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 BTN1A1Q13410 526 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 KCNJ8Q15842 424 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 C5orf46Q6UWT4 87 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 GOLT1AQ6ZVE7 132 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 TMEM256Q8N2U0 113 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 Q8N976 141 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 OR11H6Q8NGC7 330 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 KLK6Q92876 244 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 ABHD14BQ96IU4 210 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 NRTNQ99748 197 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 FAM96AQ9H5X1 160 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 PLSCR3Q9NRY6 295 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF492Q9P255 531 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 RFNGQ9Y644 331 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 TCF20Q9UGU0 1960 aaKnown RBP4.18□□□□□ -1.74
BRCA1-224ENST00000497488 PTPRJQ12913 1337 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 PLXNA3P51805 1871 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 IGHV3-64DA0A0J9YX35 117 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 PRORSD1PA6NEY8 169 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 M0R381 172 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 RGS5O15539 181 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 FSTL3O95633 263 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 MT-CO2P00403 227 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 GABRA3P34903 492 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 LOXL1Q08397 574 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-224ENST00000497488 C9orf64Q5T6V5 341 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 LAIR2Q6ISS4 152 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 CD177Q8N6Q3 437 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF439Q8NDP4 499 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 GNPDA2Q8TDQ7 276 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 CT55Q8WUE5 264 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF382Q96SR6 550 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 PRNDQ9UKY0 176 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 HSPB11Q9Y547 144 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 MYO7AQ13402 2215 aa4.17□□□□□ -1.74
BRCA1-224ENST00000497488 MYO9BQ13459 2157 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 IGHV3-49A0A0A0MS15 119 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 TRAPPC13A5PLN9 417 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 LOC730098B7Z3J9 87 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 PRSS44E7EML9 344 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF207O43670 478 aaKnown RBP4.16□□□□□ -1.74
BRCA1-224ENST00000497488 APOMO95445 188 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 CXorf1O96002 111 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 IGLV3-27P01718 113 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 HLA-DRB1P01911 266 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 SERPINE1P05121 402 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 S100A2P29034 98 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 LHX2P50458 406 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 ESRRGP62508 458 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-224ENST00000497488 FABP9Q0Z7S8 132 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 TMEM78Q5T7P6 136 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 DHFR2Q86XF0 187 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 ANKRD29Q8N6D5 301 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 OR8A1Q8NGG7 326 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 C2orf15Q8WU43 125 aaKnown RBP4.16□□□□□ -1.74
BRCA1-224ENST00000497488 C11orf40Q8WZ69 217 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 CNBD2Q96M20 576 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 KLF6Q99612 283 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-224ENST00000497488 CHCHD7Q9BUK0 85 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 MS4A8Q9BY19 250 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 DHCR7Q9UBM7 475 aaKnown RBP4.16□□□□□ -1.74
BRCA1-224ENST00000497488 MYH11P35749 1972 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 TSC2P49815 1807 aa4.16□□□□□ -1.74
BRCA1-224ENST00000497488 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-224ENST00000497488 PDCD11Q14690 1871 aaKnown RBP4.15□□□□□ -1.74
BRCA1-224ENST00000497488 MIA3Q5JRA6 1907 aa4.15□□□□□ -1.74
BRCA1-224ENST00000497488 PVALEFA0A1B0GWK0 134 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 IGSF23A1L1A6 192 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 NKX2-6A6NCS4 301 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 A6NDX4 124 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 A8MWL6 223 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 PIRO00625 290 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 HCRTO43612 131 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 ORC5O43913 435 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 RNF224P0DH78 156 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 CDK2P24941 298 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 ARPP19P56211 112 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 RPS20P60866 119 aaKnown RBP4.15□□□□□ -1.75
BRCA1-224ENST00000497488 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 AKR1C8PQ5T2L2 129 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 LRP11Q86VZ4 500 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 GDPD1Q8N9F7 314 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 Q8N9W7 124 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 GRPEL2Q8TAA5 225 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 MS4A6EQ96DS6 147 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 PDXPQ96GD0 296 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 TSPAN32Q96QS1 320 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 GPER1Q99527 375 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM147Q9BVK8 224 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 PARVBQ9HBI1 364 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM38BQ9NVV0 291 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 ENOPH1Q9UHY7 261 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 DNAJC12Q9UKB3 198 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 COQ4Q9Y3A0 265 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 PRSS21Q9Y6M0 314 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms