RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 C1orf229Q6ZS94 237 aaPredicted RBP17.27■□□□□ 0.36
FGFR1-223ENST00000496296 SSX7Q7RTT5 188 aa17.27■□□□□ 0.36
FGFR1-223ENST00000496296 P2RX4Q99571 388 aa17.27■□□□□ 0.36
FGFR1-223ENST00000496296 A0A087WWC5 75 aa17.27■□□□□ 0.35
FGFR1-223ENST00000496296 SAA2-SAA4A0A096LPE2 208 aa17.27■□□□□ 0.35
FGFR1-223ENST00000496296 C1orf196B1AJZ1 125 aa17.27■□□□□ 0.35
FGFR1-223ENST00000496296 SAA2P0DJI9 122 aaPredicted RBP17.27■□□□□ 0.35
FGFR1-223ENST00000496296 GPR6P46095 362 aaPredicted RBP17.27■□□□□ 0.35
FGFR1-223ENST00000496296 GNG10P50151 68 aa17.27■□□□□ 0.35
FGFR1-223ENST00000496296 OR4A16Q8NH70 328 aa17.27■□□□□ 0.35
FGFR1-223ENST00000496296 GGACTQ9BVM4 153 aa17.27■□□□□ 0.35
FGFR1-223ENST00000496296 DOCK11Q5JSL3 2073 aa17.26■□□□□ 0.35
FGFR1-223ENST00000496296 H3BQ15 152 aa17.26■□□□□ 0.35
FGFR1-223ENST00000496296 RBMXL2O75526 392 aaKnown RBP17.26■□□□□ 0.35
FGFR1-223ENST00000496296 UTF1Q5T230 341 aa17.26■□□□□ 0.35
FGFR1-223ENST00000496296 CYB561D1Q8N8Q1 229 aa17.26■□□□□ 0.35
FGFR1-223ENST00000496296 MALSU1Q96EH3 234 aa17.26■□□□□ 0.35
FGFR1-223ENST00000496296 PTPN13Q12923 2485 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 SPTAN1Q13813 2472 aaKnown RBP17.25■□□□□ 0.35
FGFR1-223ENST00000496296 A0A1W2PPE3 182 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 MAP1LC3B2A6NCE7 125 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 OVOL3O00110 214 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 FGF7P21781 194 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 AKIRIN2Q53H80 203 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 ACSM6Q6P461 480 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 SLC25A48Q6ZT89 311 aaKnown RBP17.25■□□□□ 0.35
FGFR1-223ENST00000496296 SLC35E3Q7Z769 313 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 LYG1Q8N1E2 194 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 RPP25LQ8N5L8 163 aaKnown RBP17.25■□□□□ 0.35
FGFR1-223ENST00000496296 MAP1LC3BQ9GZQ8 125 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 TMEM140Q9NV12 185 aa17.25■□□□□ 0.35
FGFR1-223ENST00000496296 SETXQ7Z333 2677 aaKnown RBP17.25■□□□□ 0.35
FGFR1-223ENST00000496296 TET2Q6N021 2002 aaPredicted RBP17.25■□□□□ 0.35
FGFR1-223ENST00000496296 IGKV1D-33P01593 117 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 IGKV1-33P01594 117 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 AKR1C3P42330 323 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 WDR25Q64LD2 544 aaPredicted RBP17.24■□□□□ 0.35
FGFR1-223ENST00000496296 LCN15Q6UWW0 184 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 YPEL4Q96NS1 127 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 NPCDR1Q9BY65 106 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 PATZ1Q9HBE1 687 aaKnown RBP17.24■□□□□ 0.35
FGFR1-223ENST00000496296 GNG13Q9P2W3 67 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 WDR83OSQ9Y284 106 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 CTXND1A0A1B0GTU2 59 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 NDUFS7O75251 213 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 IFNA1P01562 189 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 IFNA17P01571 189 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 COX6B1P14854 86 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 TAGLN2P37802 199 aaKnown RBP17.24■□□□□ 0.35
FGFR1-223ENST00000496296 OR2B8PP59922 312 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 CCL19Q99731 98 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 VAX2Q9UIW0 290 aa17.24■□□□□ 0.35
FGFR1-223ENST00000496296 FOXA2Q9Y261 457 aaPredicted RBP17.24■□□□□ 0.35
FGFR1-223ENST00000496296 PUS1Q9Y606 427 aaKnown RBP eCLIP17.24■□□□□ 0.35
FGFR1-223ENST00000496296 ZNF98A6NK75 572 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 C15orf61A6NNL5 157 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 PRSS46E5RG02 174 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 IL6RP08887 468 aaPredicted RBP17.23■□□□□ 0.35
FGFR1-223ENST00000496296 DLX6P56179 175 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 FAM90A2PQ658T7 463 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 ZNF383Q8NA42 475 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 TVP23CQ96ET8 276 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 C20orf24Q9BUV8 137 aa17.23■□□□□ 0.35
FGFR1-223ENST00000496296 C17orf112F2Z3M2 114 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 MPDU1O75352 247 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 ELLP55199 621 aaPredicted RBP17.22■□□□□ 0.35
FGFR1-223ENST00000496296 ERVFRD-1P60508 538 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 DOPEY1Q5JWR5 2465 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 Q8N7P7 452 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 TMEM14BQ9NUH8 114 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 SLC39A9Q9NUM3 307 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 PPIAL4CA0A0B4J2A2 164 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 hCG_1809904A0A1W2PP81 198 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 A0A1W2PPE2 198 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 A0A1W2PR64 198 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 A0A1W2PRV1 198 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 PPIAL4GP0DN37 164 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 RAB5AP20339 215 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 RPL35P42766 123 aaKnown RBP17.22■□□□□ 0.35
FGFR1-223ENST00000496296 AKR1D1P51857 326 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 IQCF2Q8IXL9 164 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 C8orf31Q8N9H6 132 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 C8orf46Q8TAG6 207 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 C2CD4CQ8TF44 421 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 NIPSNAP3BQ9BS92 247 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 TCF19Q9Y242 345 aa17.22■□□□□ 0.35
FGFR1-223ENST00000496296 B4DEV8 164 aa17.21■□□□□ 0.35
FGFR1-223ENST00000496296 IGHV1-8P0DP01 117 aa17.21■□□□□ 0.35
FGFR1-223ENST00000496296 DLK1P80370 383 aa17.21■□□□□ 0.35
FGFR1-223ENST00000496296 TMEM249Q2WGJ8 235 aa17.21■□□□□ 0.35
FGFR1-223ENST00000496296 SPINK9Q5DT21 86 aa17.21■□□□□ 0.35
FGFR1-223ENST00000496296 RBMS3Q6XE24 437 aaKnown RBP17.21■□□□□ 0.35
FGFR1-223ENST00000496296 ZFP82Q8N141 532 aa17.21■□□□□ 0.35
FGFR1-223ENST00000496296 SSBP3Q9BWW4 388 aaPredicted RBP17.21■□□□□ 0.35
FGFR1-223ENST00000496296 C5orf52A6NGY3 159 aa17.2■□□□□ 0.34
FGFR1-223ENST00000496296 HRASP01112 189 aa17.2■□□□□ 0.34
FGFR1-223ENST00000496296 FBP1P09467 338 aa17.2■□□□□ 0.34
FGFR1-223ENST00000496296 FFAR4Q5NUL3 377 aa17.2■□□□□ 0.34
FGFR1-223ENST00000496296 SSX9Q7RTT3 188 aa17.2■□□□□ 0.34
FGFR1-223ENST00000496296 ZNF709Q8N972 641 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms