RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 IL9P15248 144 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 PSMB8P28062 276 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 ALDH3A1P30838 453 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 CD79BP40259 229 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 HADHBP55084 474 aaKnown RBP0.4□□□□□ -2.35
CMC1-211ENST00000495428 TAS2R20P59543 309 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 RAB14P61106 215 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 DNAL1Q4LDG9 190 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 RASSF6Q6ZTQ3 369 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 SPATA24Q86W54 205 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 SPERTQ8NA61 448 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 LRRC45Q96CN5 670 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 NAT8Q9UHE5 227 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 SZT2Q5T011 3432 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 UNC80Q8N2C7 3258 aa0.4□□□□□ -2.35
CMC1-211ENST00000495428 HEATR5BQ9P2D3 2071 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 PTPRSQ13332 1948 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 MICAL3Q7RTP6 2002 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 OR51F1A6NGY5 319 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 IBA57-AS1B1ANH7 110 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 CCRL2O00421 344 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 EMP1P54849 157 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 RPS24P62847 133 aaKnown RBP0.39□□□□□ -2.35
CMC1-211ENST00000495428 HLA-DRB3P79483 266 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 PMS2P3Q13401 168 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 ELOBQ15370 118 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 CRLF3Q8IUI8 442 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 GID4Q8IVV7 300 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 LFNGQ8NES3 379 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 CHST6Q9GZX3 395 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 MS4A6AQ9H2W1 248 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 TREM1Q9NP99 234 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 ZNHIT6Q9NWK9 470 aaKnown RBP0.39□□□□□ -2.35
CMC1-211ENST00000495428 A0A1W2PP64 1363 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 DCHS1Q96JQ0 3298 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 MED1Q15648 1581 aaPredicted RBP0.39□□□□□ -2.35
CMC1-211ENST00000495428 APCP25054 2843 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 DNHD1Q96M86 4753 aa0.39□□□□□ -2.35
CMC1-211ENST00000495428 SMARCA4P51532 1647 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 NIPBLQ6KC79 2804 aaeCLIP0.38□□□□□ -2.35
CMC1-211ENST00000495428 ARFGEF3Q5TH69 2177 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 LRPPRCP42704 1394 aaKnown RBP0.38□□□□□ -2.35
CMC1-211ENST00000495428 KIF24Q5T7B8 1368 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 TMEM269A0A1B0GVZ9 245 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 MEIS3P1A6NDR6 274 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 FTCDNL1E5RQL4 147 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 K7ERQ8 282 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 COX7A2LO14548 114 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 TOX3O15405 576 aaPredicted RBP0.38□□□□□ -2.35
CMC1-211ENST00000495428 CREBL2O60519 120 aaPredicted RBP0.38□□□□□ -2.35
CMC1-211ENST00000495428 ORM1P02763 201 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 IL6P05231 212 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 TRGC1P0CF51 173 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 FAM27BQ5VT28 67 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 RPP25LQ8N5L8 163 aaKnown RBP0.38□□□□□ -2.35
CMC1-211ENST00000495428 TIPINQ9BVW5 301 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 REG4Q9BYZ8 158 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 OR52A5Q9H2C5 316 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 SETD5Q9C0A6 1442 aa0.38□□□□□ -2.35
CMC1-211ENST00000495428 ZFHX4Q86UP3 3567 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 GLI3P10071 1580 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 SETBP1Q9Y6X0 1596 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 TEX50A0A1B0GTY4 177 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 C5orf49A4QMS7 147 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 F8VZ95 297 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 NSA2O95478 260 aaKnown RBP0.37□□□□□ -2.35
CMC1-211ENST00000495428 HIST1H1CP16403 213 aaKnown RBP0.37□□□□□ -2.35
CMC1-211ENST00000495428 SLCO1A2P46721 670 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 AP1S1P61966 158 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 DEFB115Q30KQ5 88 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 PLPPR5Q32ZL2 321 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 RPS19BP1Q86WX3 136 aaKnown RBP0.37□□□□□ -2.35
CMC1-211ENST00000495428 DYNAPQ8N1N2 210 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 ZNF439Q8NDP4 499 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 SGMS2Q8NHU3 365 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 TESCQ96BS2 214 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 GNPNAT1Q96EK6 184 aaPredicted RBP0.37□□□□□ -2.35
CMC1-211ENST00000495428 CCL13Q99616 98 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 SLC22A4Q9H015 551 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 HRASLSQ9HDD0 168 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 EURLQ9NYK6 297 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 COQ4Q9Y3A0 265 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 TIMM22Q9Y584 194 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 GMEB1Q9Y692 573 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 LHFPL6Q9Y693 200 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 CENPFP49454 3210 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 NUP160Q12769 1436 aa0.37□□□□□ -2.35
CMC1-211ENST00000495428 HERC2O95714 4834 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 LAMA3Q16787 3333 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 TONSLQ96HA7 1378 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 IGKV1-9A0A0C4DH69 117 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 TINCRA0A1B0GVN0 87 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 YKT6O15498 198 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 SCN2BO60939 215 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 APOMO95445 188 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 RNASE3P12724 160 aaKnown RBP0.36□□□□□ -2.35
CMC1-211ENST00000495428 EVX1P49640 407 aa0.36□□□□□ -2.35
CMC1-211ENST00000495428 RPL30P62888 115 aaKnown RBP0.36□□□□□ -2.35
CMC1-211ENST00000495428 EBPQ15125 230 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms