RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 IGLV11-55A0A075B6I3 123 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 TNFSF12O43508 249 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 ARPC4P59998 168 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 OR4A47Q6IF82 309 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 UXS1Q8NBZ7 420 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 BEST4Q8NFU0 473 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 OR4A5Q8NH83 315 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 RAB26Q9ULW5 256 aa16.55■□□□□ 0.24
HDDC3-203ENST00000494993 TRBV7-1A0A0A6YYK4 115 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 MFSD2BA6NFX1 497 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 DEFA4P12838 97 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 FCGR2CP31995 323 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 SPAG16Q8N0X2 631 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 SPARTQ8N0X7 666 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 OR52B4Q8NGK2 314 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 OR13F1Q8NGS4 319 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 CXorf58Q96LI9 332 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 AIFM2Q9BRQ8 373 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 SSR3Q9UNL2 185 aa16.54■□□□□ 0.24
HDDC3-203ENST00000494993 PTHLHP12272 177 aa16.53■□□□□ 0.24
HDDC3-203ENST00000494993 BTNL8Q6UX41 500 aa16.53■□□□□ 0.24
HDDC3-203ENST00000494993 GVQW1Q8N7I0 195 aa16.53■□□□□ 0.24
HDDC3-203ENST00000494993 ZBTB34Q8NCN2 500 aa16.53■□□□□ 0.24
HDDC3-203ENST00000494993 HRASLSQ9HDD0 168 aa16.53■□□□□ 0.24
HDDC3-203ENST00000494993 RBFOX2O43251 390 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDDC3-203ENST00000494993 SCAF4O95104 1147 aaKnown RBP16.52■□□□□ 0.24
HDDC3-203ENST00000494993 PPYP01298 95 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 CLEC3BP05452 202 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 OR2B8PP59922 312 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 ANKRD55Q3KP44 614 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 HOGA1Q86XE5 327 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 FCGR1BQ92637 280 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 GGTLC1Q9BX51 225 aa16.52■□□□□ 0.24
HDDC3-203ENST00000494993 TRAV18A0A075B6X5 111 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 SDC2P34741 201 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 SCAND1P57086 179 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 TAS2R31P59538 309 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 CATR1Q13166 79 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 TM4SF20Q53R12 229 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 UNQ9165/PRO28630Q6UXU0 137 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 OR5H6Q8NGV6 325 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 MARC2Q969Z3 335 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 SLC25A38Q96DW6 304 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 SLC5A7Q9GZV3 580 aa16.51■□□□□ 0.23
HDDC3-203ENST00000494993 LOC102724200A0A096LPH7 203 aaPredicted RBP16.5■□□□□ 0.23
HDDC3-203ENST00000494993 TRAV25A0A0B4J276 109 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 IGLC7A0M8Q6 106 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 SULT1C2O00338 296 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 HPRT1P00492 218 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 C8orf88P0DMB2 117 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 NQO2P16083 231 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 GPR183P32249 361 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 POU2AF1Q16633 256 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 ZNF502Q8TBZ5 544 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 ETV7Q9Y603 341 aa16.5■□□□□ 0.23
HDDC3-203ENST00000494993 TRAV3A0A0B4J244 114 aa16.49■□□□□ 0.23
HDDC3-203ENST00000494993 UPK2O00526 184 aa16.49■□□□□ 0.23
HDDC3-203ENST00000494993 CLEC2LP0C7M8 214 aa16.49■□□□□ 0.23
HDDC3-203ENST00000494993 MXD1Q05195 221 aa16.49■□□□□ 0.23
HDDC3-203ENST00000494993 ZNF773Q6PK81 442 aa16.49■□□□□ 0.23
HDDC3-203ENST00000494993 SRSF8Q9BRL6 282 aaKnown RBP16.49■□□□□ 0.23
HDDC3-203ENST00000494993 THYN1Q9P016 225 aa16.49■□□□□ 0.23
HDDC3-203ENST00000494993 MRPL27Q9P0M9 148 aaKnown RBP16.49■□□□□ 0.23
HDDC3-203ENST00000494993 A0A0A6YYH2 397 aa16.48■□□□□ 0.23
HDDC3-203ENST00000494993 A6NJ64 397 aa16.48■□□□□ 0.23
HDDC3-203ENST00000494993 ELLP55199 621 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-203ENST00000494993 FXYD4P59646 89 aa16.48■□□□□ 0.23
HDDC3-203ENST00000494993 ZNF585BQ52M93 769 aa16.48■□□□□ 0.23
HDDC3-203ENST00000494993 RBPMS2Q6ZRY4 209 aaKnown RBP16.48■□□□□ 0.23
HDDC3-203ENST00000494993 COMMD5Q9GZQ3 224 aa16.48■□□□□ 0.23
HDDC3-203ENST00000494993 UFC1Q9Y3C8 167 aa16.48■□□□□ 0.23
HDDC3-203ENST00000494993 IGHV3-35A0A0C4DH35 117 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 FGF2P09038 288 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 PTBP1P26599 531 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDDC3-203ENST00000494993 IDNKQ5T6J7 187 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 PLET1Q6UQ28 207 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 ZNF818PQ6ZRF7 136 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 OR1L6Q8NGR2 347 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 OR51H1Q8NH63 302 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 ZNF436Q9C0F3 470 aaPredicted RBP16.47■□□□□ 0.23
HDDC3-203ENST00000494993 RNF167Q9H6Y7 350 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 AUNIPQ9H7T9 357 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 TMEM140Q9NV12 185 aa16.47■□□□□ 0.23
HDDC3-203ENST00000494993 S1PR2O95136 353 aa16.46■□□□□ 0.23
HDDC3-203ENST00000494993 FCER2P06734 321 aa16.46■□□□□ 0.23
HDDC3-203ENST00000494993 DMBX1Q8NFW5 382 aa16.46■□□□□ 0.23
HDDC3-203ENST00000494993 GIMAP1Q8WWP7 306 aa16.46■□□□□ 0.23
HDDC3-203ENST00000494993 QTRT1Q9BXR0 403 aaKnown RBP16.46■□□□□ 0.23
HDDC3-203ENST00000494993 PLEKHA2Q9HB19 425 aa16.46■□□□□ 0.23
HDDC3-203ENST00000494993 TGOLN2O43493 480 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 AADACL3Q5VUY0 350 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 THOC7Q6I9Y2 204 aaKnown RBP16.45■□□□□ 0.22
HDDC3-203ENST00000494993 TMEM17Q86X19 198 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 OR2C3Q8N628 320 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 GDPD1Q8N9F7 314 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 OR5AP2Q8NGF4 316 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 OR10W1Q8NGF6 305 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 CD300LFQ8TDQ1 290 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 VN1R17PQ8TDU5 208 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms