RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 RAB1CQ92928 201 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 FAM122AQ96E09 287 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 PCGF1Q9BSM1 259 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 NPCDR1Q9BY65 106 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 CHODLQ9H9P2 273 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 TEX50A0A1B0GTY4 177 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 H7C2Y5 167 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 NDUFS7O75251 213 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 IFNA10P01566 189 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 CDKN1AP38936 164 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 PPT1P50897 306 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 ELLP55199 621 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 RAB2AP61019 212 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 ETV3LQ6ZN32 361 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 TGIF2LXQ8IUE1 241 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 RPP25LQ8N5L8 163 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 SFT2D1Q8WV19 159 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 TIMD4Q96H15 378 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 C1orf159Q96HA4 380 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 RARRES2Q99969 163 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 PATZ1Q9HBE1 687 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 TMA7Q9Y2S6 64 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 WASHC3Q9Y3C0 194 aa8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-209ENST00000494674 MYO18BQ8IUG5 2567 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 CACNA1BQ00975 2339 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 SPTAN1Q13813 2472 aaKnown RBP8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 FAM74A7A6NL05 159 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 NPBWR1P48145 328 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 RPP30P78346 268 aaKnown RBP8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 DLK1P80370 383 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 HNF4GQ14541 408 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 PEA15Q15121 130 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 BSXQ3C1V8 233 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 FAM74A3Q4VXF1 159 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 BEND2Q8NDZ0 799 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 SLC24A4Q8NFF2 622 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 OR4P4Q8NGL7 312 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 CLDND2Q8NHS1 167 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 TMEM167AQ8TBQ9 72 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 SUN5Q8TC36 379 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 LHX4Q969G2 390 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 RITA1Q96K30 269 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 CLEC7AQ9BXN2 247 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 EIF5A2Q9GZV4 153 aaKnown RBP8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 UBTD1Q9HAC8 227 aa8.59□□□□□ -1.03
PRPF4B-209ENST00000494674 A0A1W2PPH5 198 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 RBFOX3A6NFN3 312 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 CGB1A6NKQ9 187 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 LY6LH3BQJ8 138 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 CA2P00918 260 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 HBE1P02100 147 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 LIPFP07098 398 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 NPY1RP25929 384 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 CD1BP29016 333 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 ICAM4Q14773 271 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 ZNF506Q5JVG8 444 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 LDLRAD2Q5SZI1 272 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 TREML4Q6UXN2 200 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 OR5B3Q8NH48 314 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 AIFM2Q9BRQ8 373 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 PBDC1Q9BVG4 233 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 KPTNQ9Y664 436 aa8.58□□□□□ -1.04
PRPF4B-209ENST00000494674 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 E7EUB6 86 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 BUB1B-PAK6H3BSN5 160 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 OPN1MWP04001 364 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 OPN1MW2P0DN77 364 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 OPN1MW3P0DN78 364 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 IL3RAP26951 378 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 RAB13P51153 203 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 ARSJQ5FYB0 599 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 OR4A5Q8NH83 315 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 IGFBPL1Q8WX77 278 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 NDUFA4L2Q9NRX3 87 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 LSM4Q9Y4Z0 139 aaKnown RBP8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 ABCA2Q9BZC7 2435 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 LOC102723971A0A1B0GUV8 181 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 MAP1LC3B2A6NCE7 125 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 INS-IGF2F8WCM5 200 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 SNAPINO95295 136 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 RNF224P0DH78 156 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 USF1P22415 310 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 COX7A1P24310 79 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 MC5RP33032 325 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 PRRX1P54821 245 aa8.57□□□□□ -1.04
PRPF4B-209ENST00000494674 FGF8P55075 233 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms