RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 COMMD7Q86VX2 200 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 GPR32P1Q8NGA4 272 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 TMA16Q96EY4 203 aaKnown RBP0.93□□□□□ -2.26
SMC4-223ENST00000493695 CXorf21Q9HAI6 301 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 PXMP4Q9Y6I8 212 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 RTTNQ86VV8 2226 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 COL6A6A6NMZ7 2263 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 DCCP43146 1447 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 C9orf84Q5VXU9 1444 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 TMEM269A0A1B0GVZ9 245 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 H0Y980 276 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 M0QZ92 97 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 LEPROTO15243 131 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 APOEP02649 317 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 C1QAP02745 245 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 KRT7P08729 469 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 MARCKSL1P49006 195 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 RAB5BP61020 215 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 NAA20P61599 178 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 BATFQ16520 125 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 CLVS2Q5SYC1 327 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 C1orf195Q5TG92 126 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 C7orf65Q6ZTY9 151 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 FP248Q71RG6 208 aaPredicted RBP0.92□□□□□ -2.26
SMC4-223ENST00000493695 SLC36A1Q7Z2H8 476 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 SLC51BQ86UW2 128 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 OR1M1Q8NGA1 313 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 MBD3L1Q8WWY6 194 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 ROPN1LQ96C74 230 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 USE1Q9NZ43 259 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 BRWD1Q9NSI6 2320 aa0.92□□□□□ -2.26
SMC4-223ENST00000493695 GLI3P10071 1580 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 GREB1Q4ZG55 1949 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 MYH11P35749 1972 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 MEIS3P1A6NDR6 274 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 EVPLLA8MZ36 301 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 IBA57-AS1B1ANH7 110 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 DEXIO95424 95 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 FAM228BP0C875 321 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 FGF6P10767 208 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 MSNP26038 577 aaKnown RBP0.91□□□□□ -2.26
SMC4-223ENST00000493695 MAP2K4P45985 399 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 REG1BP48304 166 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 BLVRAP53004 296 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 RSU1Q15404 277 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 ARHGAP11BQ3KRB8 267 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 FAM27BQ5VT28 67 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 CD200R1LQ6Q8B3 271 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 HIST2H3AQ71DI3 136 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 C10orf105Q8TEF2 133 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 RAB8BQ92930 207 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 DIRAS2Q96HU8 199 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 FKBP14Q9NWM8 211 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 TIMM22Q9Y584 194 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 LHFPL6Q9Y693 200 aa0.91□□□□□ -2.26
SMC4-223ENST00000493695 LRRN3E7EW58 273 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 PPBPP02775 128 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 CSN1S1P47710 185 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 RAB13P51153 203 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 OR4D2P58180 307 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 OGFRL1Q5TC84 451 aaPredicted RBP0.9□□□□□ -2.27
SMC4-223ENST00000493695 C1orf158Q8N1D5 194 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 TMEM86AQ8N2M4 240 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 ANKRD7Q92527 254 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 OPTNQ96CV9 577 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 CST9LQ9H4G1 147 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 XPNPEP1Q9NQW7 623 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 MED9Q9NWA0 146 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 NKIRAS1Q9NYS0 192 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 ANGPT4Q9Y264 503 aa0.9□□□□□ -2.27
SMC4-223ENST00000493695 TONSLQ96HA7 1378 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 TRBV10-2A0A0K0K1G8 114 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 I3L521 148 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 ACOX3O15254 700 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 TPM3P06753 285 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 RPSAP08865 295 aaKnown RBP0.89□□□□□ -2.27
SMC4-223ENST00000493695 SRP19P09132 144 aaKnown RBP0.89□□□□□ -2.27
SMC4-223ENST00000493695 UCHL3P15374 230 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 CAV1Q03135 178 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 FABP9Q0Z7S8 132 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 C9orf64Q5T6V5 341 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 SYPL2Q5VXT5 272 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 ALKAL1Q6UXT8 129 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 C10orf67Q8IYJ2 551 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 Q8N2B8 174 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 TBC1D19Q8N5T2 526 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 ACOT12Q8WYK0 555 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 DRC3Q9H069 523 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 FGFR1OP2Q9NVK5 253 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 NAT8Q9UHE5 227 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 FUT9Q9Y231 359 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 MED13Q9UHV7 2174 aa0.89□□□□□ -2.27
SMC4-223ENST00000493695 MAST2Q6P0Q8 1798 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 KIF24Q5T7B8 1368 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 IGKV3D-7A0A0C4DH55 119 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 IGKV3OR2-268A0A0C4DH90 116 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 INMT-MINDY4F8WBC2 141 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 IGHV3-7P01780 117 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 CLPSP04118 112 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 ISG15P05161 165 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms