RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 C12orf77C9JDV5 145 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 PNKDQ8N490 385 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 SSBP3Q9BWW4 388 aaPredicted RBP17.05■□□□□ 0.32
RNF40-203ENST00000493683 C19orf67A6NJJ6 358 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 REG1AP05451 166 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 VKORC1L1Q8N0U8 176 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 RPP21Q9H633 154 aaKnown RBP17.05■□□□□ 0.32
RNF40-203ENST00000493683 C1QTNF5Q9BXJ0 243 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 FBLN5Q9UBX5 448 aa17.05■□□□□ 0.32
RNF40-203ENST00000493683 CTAG1AP78358 180 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 ICAM4Q14773 271 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 TEX45Q8NA69 505 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 TMEM190Q8WZ59 177 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 SDF2L1Q9HCN8 221 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 FOXI3A8MTJ6 420 aaPredicted RBP17.04■□□□□ 0.32
RNF40-203ENST00000493683 JKAMPQ9P055 326 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 IGKV3D-15A0A087WSY6 115 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 IGKV3-15P01624 115 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 TIMP4Q99727 224 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 RTBDNQ9BSG5 229 aaPredicted RBP17.04■□□□□ 0.32
RNF40-203ENST00000493683 CRYBA2P53672 197 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 LEAP2Q969E1 77 aa17.04■□□□□ 0.32
RNF40-203ENST00000493683 TBL2Q9Y4P3 447 aaKnown RBP17.04■□□□□ 0.32
RNF40-203ENST00000493683 A0A1B0GV72 72 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 APOBEC3AP31941 199 aaPredicted RBP17.03■□□□□ 0.32
RNF40-203ENST00000493683 AICDAQ9GZX7 198 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 A0A1W2PR77 199 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 IZUMO1RA6ND01 250 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 CEACAM4O75871 244 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 KLK15Q9H2R5 256 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 MOSP00540 346 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 ACSF3Q4G176 576 aaPredicted RBP17.03■□□□□ 0.32
RNF40-203ENST00000493683 LINC00114Q6XXX2 140 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 TMEM101Q96IK0 257 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 SGK494Q96LW2 274 aa17.03■□□□□ 0.32
RNF40-203ENST00000493683 NUTF2P61970 127 aaKnown RBP17.03■□□□□ 0.32
RNF40-203ENST00000493683 MRPS18CQ9Y3D5 142 aaKnown RBP17.03■□□□□ 0.32
RNF40-203ENST00000493683 MRAP2Q96G30 205 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 SCN3AQ9NY46 2000 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 CABIN1Q9Y6J0 2220 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 MSGN1A6NI15 193 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 H3BRM9 83 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 HOXA5P20719 270 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 ZNF703Q9H7S9 590 aaPredicted RBP17.02■□□□□ 0.32
RNF40-203ENST00000493683 TMEM160Q9NX00 188 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 MRPL16Q9NX20 251 aaKnown RBP17.02■□□□□ 0.32
RNF40-203ENST00000493683 DPM3Q9P2X0 92 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 CHCHD2Q9Y6H1 151 aaPredicted RBP17.02■□□□□ 0.32
RNF40-203ENST00000493683 A0A0G2JLM5 398 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 PPP1R32Q7Z5V6 425 aa17.02■□□□□ 0.32
RNF40-203ENST00000493683 A0A1B0GV90 55 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 SHISA3A0PJX4 238 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 SUMO2P61956 95 aaKnown RBP17.02■□□□□ 0.31
RNF40-203ENST00000493683 ATOH7Q8N100 152 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 C2orf88Q9BSF0 95 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 IGHV3OR16-12A0A075B7B8 117 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 IGKV3D-11A0A0A0MRZ8 115 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 RPL39P5Q59GN2 51 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 FAM74A4Q5TZK3 123 aa17.02■□□□□ 0.31
RNF40-203ENST00000493683 CGAP01215 116 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 IGFBP3P17936 291 aaPredicted RBP17.01■□□□□ 0.31
RNF40-203ENST00000493683 ZXDCQ2QGD7 858 aaPredicted RBP17.01■□□□□ 0.31
RNF40-203ENST00000493683 ARL6IP6Q8N6S5 226 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 KBTBD11-OT1A0A1B0GTJ5 212 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 RNF222A6NCQ9 220 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 APOHP02749 345 aaPredicted RBP17.01■□□□□ 0.31
RNF40-203ENST00000493683 PAX1P15863 534 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 OR52E5Q8NH55 327 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 CHODLQ9H9P2 273 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 TMEM106BQ9NUM4 274 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 SP9P0CG40 484 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 FOXJ2Q9P0K8 574 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 TNFRSF18Q9Y5U5 241 aa17.01■□□□□ 0.31
RNF40-203ENST00000493683 ZIC3O60481 467 aa17■□□□□ 0.31
RNF40-203ENST00000493683 GCSAMLQ5JQS6 135 aa17■□□□□ 0.31
RNF40-203ENST00000493683 TMEM170BQ5T4T1 132 aa17■□□□□ 0.31
RNF40-203ENST00000493683 TRAV24A0A0B4J272 114 aa17■□□□□ 0.31
RNF40-203ENST00000493683 TSPAN13O95857 204 aa17■□□□□ 0.31
RNF40-203ENST00000493683 ZNF525Q8N782 197 aa17■□□□□ 0.31
RNF40-203ENST00000493683 GTF3AQ92664 365 aaKnown RBP17■□□□□ 0.31
RNF40-203ENST00000493683 TMEM74BQ9NUR3 256 aa17■□□□□ 0.31
RNF40-203ENST00000493683 H3BTX0 84 aa17■□□□□ 0.31
RNF40-203ENST00000493683 WDR82Q6UXN9 313 aa17■□□□□ 0.31
RNF40-203ENST00000493683 A0A1B0GTI1 187 aa17■□□□□ 0.31
RNF40-203ENST00000493683 IGFBP2P18065 325 aa17■□□□□ 0.31
RNF40-203ENST00000493683 PCP4P48539 62 aa17■□□□□ 0.31
RNF40-203ENST00000493683 PEAR1Q5VY43 1037 aaPredicted RBP17■□□□□ 0.31
RNF40-203ENST00000493683 REPIN1Q9BWE0 567 aaKnown RBP17■□□□□ 0.31
RNF40-203ENST00000493683 PRDM13Q9H4Q3 707 aa17■□□□□ 0.31
RNF40-203ENST00000493683 MCM3APO60318 1980 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 MPZP25189 248 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 C10orf126Q8N4M7 172 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 NEU4Q8WWR8 484 aaPredicted RBP16.99■□□□□ 0.31
RNF40-203ENST00000493683 ZNF638Q14966 1978 aaKnown RBP16.99■□□□□ 0.31
RNF40-203ENST00000493683 TRAV8-6A0A0B4J262 113 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 C1QL2Q7Z5L3 287 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 SCGB3A1Q96QR1 104 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 NIT1Q86X76 327 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 ORMDL3Q8N138 153 aa16.99■□□□□ 0.31
RNF40-203ENST00000493683 FOXA3P55318 350 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms