RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 CDSNQ15517 529 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 TMEM249Q2WGJ8 235 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 OR4C13Q8NGP0 309 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 C8orf46Q8TAG6 207 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 FLYWCH2Q96CP2 140 aaKnown RBP8.79□□□□□ -1
PHACTR4-204ENST00000493669 NABP2Q9BQ15 211 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 TMEM133Q9H2Q1 129 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 ANKHD1Q8IWZ3 2542 aaKnown RBP8.79□□□□□ -1
PHACTR4-204ENST00000493669 YLPM1P49750 1951 aaKnown RBP8.79□□□□□ -1
PHACTR4-204ENST00000493669 SEC14L6B5MCN3 397 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 IFNA4P05014 189 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 SAA1P0DJI8 122 aaPredicted RBP8.79□□□□□ -1
PHACTR4-204ENST00000493669 MC5RP33032 325 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 TREML4Q6UXN2 200 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 Q8N7P7 452 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 RAB1CQ92928 201 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 HARBI1Q96MB7 349 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 ZNRD1Q9P1U0 126 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 DOCK11Q5JSL3 2073 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 PKDREJQ9NTG1 2253 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 USF1P22415 310 aaPredicted RBP8.79□□□□□ -1
PHACTR4-204ENST00000493669 COL8A2P25067 703 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 ERVFRD-1P60508 538 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 ZNF841Q6ZN19 808 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 SLC35E3Q7Z769 313 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 ABHD12Q8N2K0 398 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 C11orf42Q8N5U0 333 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 CYB561D1Q8N8Q1 229 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 NEU4Q8WWR8 484 aaPredicted RBP8.79□□□□□ -1
PHACTR4-204ENST00000493669 NPVFQ9HCQ7 196 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 MANBALQ9NQG1 85 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 MIOXQ9UGB7 285 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 WASHC3Q9Y3C0 194 aa8.79□□□□□ -1
PHACTR4-204ENST00000493669 SRRM4A7MD48 611 aaKnown RBP8.78□□□□□ -1
PHACTR4-204ENST00000493669 SNRNP70P08621 437 aaKnown RBP8.78□□□□□ -1
PHACTR4-204ENST00000493669 RPS16P62249 146 aaKnown RBP8.78□□□□□ -1
PHACTR4-204ENST00000493669 TMEM167AQ8TBQ9 72 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 NIPSNAP3BQ9BS92 247 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 LSM4Q9Y4Z0 139 aaKnown RBP8.78□□□□□ -1
PHACTR4-204ENST00000493669 ZFP92A6NM28 416 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 H3BQ15 152 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 FLI1Q01543 452 aaPredicted RBP8.78□□□□□ -1
PHACTR4-204ENST00000493669 C11orf71Q6IPW1 123 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 TGIF2LXQ8IUE1 241 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 OR8B3Q8NGG8 313 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 OR8B2Q96RD0 313 aa8.78□□□□□ -1
PHACTR4-204ENST00000493669 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
PHACTR4-204ENST00000493669 A0A087WWC5 75 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 TEX50A0A1B0GTY4 177 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 SMCO3A2RU48 225 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 CA2P00918 260 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 AGAP20933 346 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 CDC34P49427 236 aaPredicted RBP8.77□□□□□ -1
PHACTR4-204ENST00000493669 PRRX1P54821 245 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 FGF8P55075 233 aaPredicted RBP8.77□□□□□ -1
PHACTR4-204ENST00000493669 BSXQ3C1V8 233 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 C2orf83Q53S99 150 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 OR1L8Q8NGR8 309 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 TIMD4Q96H15 378 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 SLC25A22Q9H936 323 aa8.77□□□□□ -1
PHACTR4-204ENST00000493669 PUS1Q9Y606 427 aaKnown RBP eCLIP8.77□□□□□ -1
PHACTR4-204ENST00000493669 hCG_1809904A0A1W2PP81 198 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 A0A1W2PPE2 198 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 A0A1W2PR64 198 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 A0A1W2PRV1 198 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 TMEM8BA6NDV4 472 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 COLCA2A8K830 154 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 FOLR2P14207 255 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 RPL8P62917 257 aaKnown RBP8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 PNRC1Q12796 327 aaPredicted RBP8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 RAB31Q13636 194 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 FAM122CQ6P4D5 195 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 BEND2Q8NDZ0 799 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 RAB24Q969Q5 203 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 TVP23CQ96ET8 276 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 GGTLC1Q9BX51 225 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 A0A1W2PN81 502 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 B4DEV8 164 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 CHRNA7P36544 502 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 LGALS7P47929 136 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 PSMB3P49720 205 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 LY6DQ14210 128 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 DTX2Q86UW9 622 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 COMMD5Q9GZQ3 224 aa8.77□□□□□ -1.01
PHACTR4-204ENST00000493669 SPTBN4Q9H254 2564 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 VMA21Q3ZAQ7 101 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 FAM90A2PQ658T7 463 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 TEPPQ6URK8 271 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 MGST2Q99735 147 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 IGHV2-26A0A0B4J1V2 119 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 LYNX1G3V0Z9 82 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 IGLV1-47P01700 117 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 LYNX1P0DP58 116 aa8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 MEF2BQ02080 365 aaPredicted RBP8.76□□□□□ -1.01
PHACTR4-204ENST00000493669 HLA-DRB5Q30154 266 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms